Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq16 104 2e-17 seq39 87.8 2e-12 >seq16 Length=747318 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||||| || ||||| || || || ||||| || || ||| || ||||| Sbjct 128113 AGAACGAGATGAAGGGTAGATTCCTTCTGGATATTGTAGTCGCTGAGGGTTCGGCCGTCT 128054 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||| || ||| | || || ||||| |||||||| ||||| || || || || Sbjct 128053 TCCAGCTGCTTACCCGCAAAGATAAGTCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCC 127994 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | || || | || || |||| || | |||| Sbjct 127993 TGAATCTTGCTCTTCACATTATCGATGGTGTCTGACGACTCGACCTCTAAGGTGATGGTC 127934 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||||| ||| || || || || ||||| Sbjct 127933 TTGCCGGTCAGAGTCTTCACAAAGATCTGCAT 127902 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || ||||| | || || || || ||||||||||| || | ||||| |||| Sbjct 127595 AAGGACGAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGACCGTC 127536 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || || ||||| || || |||| | ||||||||||| |||||||| ||||| || || Sbjct 127535 CTCGAGTTGCTTTCCAGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTATC 127476 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || || ||| || | || || || ||||| || | || | ||| Sbjct 127475 CTGAATCTTCGATTTGACATTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGT 127416 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 |||||| || | || || ||||| || ||||| || Sbjct 127415 CTTGCCAGTGAGGGTCTTGACGAAGATCTGCATGTT 127380 Score = 82.4 bits (90), Expect = 8e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || ||||||||||| || | | ||| || | || ||||||||||||||| Sbjct 127870 GTAGACTCCTTCTGAATGTTGTAGTCGGATAGGGTTCGGCCATCCTCAAGCTGCTTGCCG 127811 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTT 64359 || |||| | ||||| ||||||||||| || || || || ||||| || || Sbjct 127810 GCGAAAATCAATCGCTGTTGGTCGGGAGGGATACCCTCCTTGTCTTGGATCTT 127758 >seq39 Length=331608 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || || |||||||| || | || ||| || ||||||| |||||||||||||| | Sbjct 20947 TCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAG 20888 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 || | ||||| |||||||| || ||||| || || || || || || ||| ||| Sbjct 20887 ATTAATCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCCTGAATCTTGGACTTGACATTG 20828 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | || || | | ||||| || | || | ||||| || || | || || ||| Sbjct 20827 TCGATAGTGTCGCTAGACTCCACCTCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGACG 20768 Query 64433 AAAATTTGCAT 64443 ||||| ||||| Sbjct 20767 AAAATCTGCAT 20757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499642314267120