Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq16 123 2e-23 seq1 109 5e-19 seq24 98.7 1e-15 seq39 95.1 1e-14 >seq16 Length=747318 Score = 123 bits (136), Expect = 2e-23 Identities = 168/231 (73%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||| | || | ||| | | | |||||||| ||||||||||||||||| Sbjct 127610 GCCACCACGTAGACGAAGGACGAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGCT 127551 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || ||| || |||||||||||| || || | | || | ||||| ||||| ||||| Sbjct 127550 CAGAGTGCGACCGTCCTCGAGTTGCTTTCCAGCGAAAATCAATCGCTGCTGGTCAGGAGG 127491 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564 || ||||| || || ||| | || | ||| | |||| | | |||||||| |||||| Sbjct 127490 AATGCCTTCCTTATCC-TGAATCTTCGATTTGACATTGT-CGATGGTGTCGGAGGACTCC 127433 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||||| | || | || || ||||| || || || || || ||||||||| Sbjct 127432 ACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATG 127382 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||| | ||| | | | || ||||| || || ||||||||||| | || || ||| || Sbjct 128111 AACGAGATGAAGGGTAGATTCCTTCTGGATATTGTAGTCGCTGAGGGTTCGGCCGTCTTC 128052 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 || || ||||| | | |||| || ||||||||||| || || ||||| || ||||| | Sbjct 128051 CAGCTGCTTACCCGCAAAGATAAGTCGCTGTTGGTCGGGGGGAATACCCTCCTTGTC-CT 127993 Query 138525 GATTTTTTGT-TTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTT 138583 || | || | || | | || | |||||| | |||||| ||||| | || | || | Sbjct 127992 GAATCTTGCTCTTCACATTATCGATGGTGTCTGACGACTCGACCTCTAAGGTGATGGTCT 127933 Query 138584 TACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || |||||||| || ||||| |||||||| Sbjct 127932 TGCCGGTCAGAGTCTTCACAAAGATCTGCAT 127902 >seq1 Length=2525816 Score = 109 bits (120), Expect = 5e-19 Identities = 342/524 (65%), Gaps = 27/524 (5%) Strand=Plus/Minus Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCC 52385 || || ||| ||||||| ||||| | ||||| || | ||||| | | | | || Sbjct 592591 GTTCCCTGCATTCGCAAGAAGGCCGACTGGGCTCTGCAATGGATTTCTGACAAGAACTCC 592532 Query 52386 ACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCG-GCAG 52444 || | || |||| | | |||||||| |||||||| | | || ||| | | | Sbjct 592531 ACCTTTGCTCAGCGTCTCATTGCCTTCGCTGCTGTCGAGGG--TATCTTCTTCAGTGGTG 592474 Query 52445 CTTT-GCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCA 52503 | || ||| ||||||| | | || | | || | |||||||| || || ||| || Sbjct 592473 CATTCGCCTCCATCTTCTGGTTGAAGAAGCGTGGTCTGATGCCCGGTCTCACCTTCTCCA 592414 Query 52504 ACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT-CTACTA---- 52558 ||||| | || || || || || || || ||||| ||||| || ||||| ||| | Sbjct 592413 ACGAGCTCATCTCTCGTGATGAGGGTCTACACACTGACTTCGCTTGCCTACTATTCACAC 592354 Query 52559 ----CAAGACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGG 52614 ||||| ||| ||| || |||| |||| || || ||| | Sbjct 592353 ACCTCAAGAACCGCC---CCGGCAA---------GGACGTCATCCAGAAGATCATCACAG 592306 Query 52615 AGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCA 52674 | || || || |||||| |||| || | || | || ||||| | |||||||||| Sbjct 592305 ATGCTGTCGCCATCGAACAGGAATTCCTGACCGAGGCTCTGCCCTGTGCTCTGCTGGGCA 592246 Query 52675 TGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGC 52734 ||||||| | | ||| | ||||||||||| || || || || || |||| | Sbjct 592245 TGAACGCCAATTTGATGAAGCAATACATCGAGTTCGTCGCCGACCGCCTACTGGTCGCTC 592186 Query 52735 TCGGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCG 52793 |||| || | | ||| || | || ||| || || || || ||| | |||||||| Sbjct 592185 TCGG-CAACGAGAAGGTCTACCGATCTACCAACCCCTTCGACTTCATGGAGAACATTTCC 592127 Query 52794 CTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 |||| |||||||||||||| ||||||||||| ||||| || || Sbjct 592126 CTTGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTA 592083 >seq24 Length=497866 Score = 98.7 bits (108), Expect = 1e-15 Identities = 135/186 (73%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || ||||||||| || || |||| Sbjct 474235 GACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCG 474176 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| || ||||||||||| || || ||||| || ||||| ||| || || | | Sbjct 474175 AAGATCAGGCGCTGTTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACA 474116 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 |||| | | |||||||| ||||||||||||| || | || || || ||||| || || Sbjct 474115 TTGT-CGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTT 474057 Query 138600 TACAAA 138605 || || Sbjct 474056 CACGAA 474051 >seq39 Length=331608 Score = 95.1 bits (104), Expect = 1e-14 Identities = 140/195 (72%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||| | || || ||| ||||| || || |||| | Sbjct 20948 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAA 20889 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTAAT 138540 ||||| ||||||||||| || || || || || ||||| ||| | || | || || Sbjct 20888 GATTAATCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTC-CTGAATCTTGGACTTGACAT 20830 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || || | |||||| | ||||||||||| | || | || ||||| || || || || Sbjct 20829 TG-TCGATAGTGTCGCTAGACTCCACCTCAAGGGTGATAGTCTTACCCGTGAGGGTCTTG 20771 Query 138601 ACAAAAATCTGCATG 138615 || |||||||||||| Sbjct 20770 ACGAAAATCTGCATG 20756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496259931094560