Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11]
398 sequences; 37,551,009 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq24 138 1e-27
seq39 136 4e-27
seq16 118 1e-21
>seq24
Length=497866
Score = 138 bits (152), Expect = 1e-27
Identities = 151/201 (75%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
||||| || | ||| |||||| ||||| ||||||||||| || || || |||| |||
Sbjct 474250 ACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCG 474191
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|||||||| |||||||| |||| |||||| ||||||| || | | |||||||||| |
Sbjct 474190 AGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGGATACCCTCCTTGTCCTGG 474131
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
||||| ||||| | | | |||||| || ||||| || | |||||||| |||
Sbjct 474130 ATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTG 474071
Query 46565 CCCGTCAGCGTTTTAACAAAG 46585
|||||||| || || || |||
Sbjct 474070 CCCGTCAGGGTCTTCACGAAG 474050
>seq39
Length=331608
Score = 136 bits (150), Expect = 4e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443
||| || || | || |||||||| ||||| ||||||||||| || || || |||| ||
Sbjct 20966 CACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCTTC 20907
Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
|||||||||||||||||| || || ||||| ||||||| || | | ||||||||||
Sbjct 20906 GAGCTGCTTGCCGGCGAAGATTAATCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCCTG 20847
Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
||||| ||||| | | | |||||||| || ||||| || | ||||| || ||
Sbjct 20846 AATCTTGGACTTGACATTGTCGATAGTGTCGCTAGACTCCACCTCAAGGGTGATAGTCTT 20787
Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||||| || || || || || || |||||
Sbjct 20786 ACCCGTGAGGGTCTTGACGAAAATCTGCAT 20757
>seq16
Length=747318
Score = 118 bits (130), Expect = 1e-21
Identities = 166/233 (71%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424
|||| || | || ||| | || ||||| | || |||||| || || |||||||||
Sbjct 127611 TGCCACCACGTAGACGAAGGACGAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGC 127552
Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484
|||||||| |||| ||||| ||||| || ||||| ||||| ||||||||||| | |
Sbjct 127551 TCAGAGTGCGACCGTCCTCGAGTTGCTTTCCAGCGAAAATCAATCGCTGCTGGTCAGGAG 127492
Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544
| | || ||||| ||| |||||| |||| | | | |||||| || ||||
Sbjct 127491 GAATGCCTTCCTTATCCTGAATCTTCGATTTGACATTGTCGATGGTGTCGGAGGACTCCA 127432
Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597
| || | |||||||| ||||| || || || || || ||||| ||||| |||
Sbjct 127431 CCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATGTTG 127379
Score = 116 bits (128), Expect = 4e-21
Identities = 136/181 (75%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| || || |||||||||||||| || || | || || |||||||||||||||||
Sbjct 127865 CTCCTTCTGAATGTTGTAGTCGGATAGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAA 127806
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
||||| ||||| ||||||| || | | ||||||||| ||||||| ||||| |||
Sbjct 127805 AATCAATCGCTGTTGGTCGGGAGGGATACCCTCCTTGTCTTGGATCTTCGACTTGA-CGT 127747
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| | | |||||| || ||||| || | |||||||| || || || || || || |
Sbjct 127746 TGTCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCTTTCCGGTAAGGGTCTTGA 127687
Query 46581 C 46581
|
Sbjct 127686 C 127686
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|| ||||| | ||| ||||| ||||||||||||||| || || || |||| ||
Sbjct 128110 ACGAGATGAAGGGTAGATTCCTTCTGGATATTGTAGTCGCTGAGGGTTCGGCCGTCTTCC 128051
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|||||||| || || || || | ||||| ||||||| || | | ||||||||||
Sbjct 128050 AGCTGCTTACCCGCAAAGATAAGTCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGA 127991
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
||||| |||| | | | | ||||| ||| || || || | |||||||| |||
Sbjct 127990 ATCTTGCTCTTCACATTATCGATGGTGTCTGACGACTCGACCTCTAAGGTGATGGTCTTG 127931
Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| ||||| || || |||||||| |||||
Sbjct 127930 CCGGTCAGAGTCTTCACAAAGATCTGCAT 127902
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565235587938960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |