Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1 132 5e-26 seq16 129 6e-25 seq24 127 2e-24 seq39 116 4e-21 >seq1 Length=2525816 Score = 132 bits (146), Expect = 5e-26 Identities = 323/482 (67%), Gaps = 12/482 (2%) Strand=Plus/Plus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 ||||| || || || || || || | | ||||||| | ||| || || ||||||||| Sbjct 592098 TTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAAATGTTCTCCATGAAGTCGAAGGGGTTG 592157 Query 132685 GCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741 | | |||| ||| | |||||| || |||| || || | |||||| |||||| Sbjct 592158 GTAGATCGGTAGACCTTCTCGTTGCCGAG-AG--CGACCAGTAGGCGGTCGGCGACGAAC 592214 Query 132742 TCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGCAC-CGGCAGCGCTTC 132800 |||||||||||| ||| | | || | ||||||||| |||| ||||| || || Sbjct 592215 TCGATGTATTGCTTCATCAAATTGGCGTTCATGCCCAGCAGA-GCACAGGGCAGAGCCTC 592273 Query 132801 GGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGC 132860 ||| || || || ||||||||||| || || |||| ||| | | | | || Sbjct 592274 GGTCAGGAATTCCTGTTCGATGGCGACAGCATCTGTGATGATCTTCTGGATGACGTCCTT 592333 Query 132861 GCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTC 132920 || || || | | | || |||| | | |||||| ||||| || | ||||| Sbjct 592334 GCCGGGGCGGTTCTTGAGGTGTGTGAATAGTAGGCAAGCGAAGTCAGTGTGTAGACCCTC 592393 Query 132921 GTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAG 132980 || | || ||||| |||||| ||| || | |||||||| || || || || || | Sbjct 592394 ATCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATCAGACCACGCTTCTTCAA 592453 Query 132981 CCAAAATATGGCGGCGAAACTGCCCGA--AAAGAAGACGCCCTCGACGGCCGCGAAAGCC 133038 ||| || |||| |||||| ||| | | ||||||| |||||||| || ||||| || Sbjct 592454 CCAGAAGATGGAGGCGAA--TGCACCACTGAAGAAGATACCCTCGACAGCAGCGAAGGCA 592511 Query 133039 ACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCC 133098 | || |||| | || |||| | ||| | ||||| |||| ||||| |||||| Sbjct 592512 ATGAGACGCTGAGCAAAGGTGGAGTTCTTGTCAGAAATCCATTGCAGAGCCCAGTCGGCC 592571 Query 133099 TT 133100 || Sbjct 592572 TT 592573 >seq16 Length=747318 Score = 129 bits (142), Expect = 6e-25 Identities = 161/217 (74%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| ||||||||| | || |||||| | | Sbjct 127902 ATGCAGATCTTTGTGAAGACTCTGACCGGCAAGACCATCACCTTAGAGGTCGAGTCGTCA 127961 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | || | | |||| || || | ||||| ||||| |||||| |||||| Sbjct 127962 GACACCATCGATAATG--TGAAGAGCAAGATTCAGGACAAGGAGGGTATTCCCCCCGACC 128019 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| || || | ||||| || |||||||| |||| || ||||||| |||||||| Sbjct 128020 AACAGCGACTTATCTTTGCGGGTAAGCAGCTGGAAGACGGCCGAACCCTCAGCGACTACA 128079 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 | ||||| |||||| | || || ||| | || || || Sbjct 128080 ATATCCAGAAGGAATCTACCCTTCATCTCGTTCTCCG 128116 Score = 114 bits (126), Expect = 1e-20 Identities = 159/219 (73%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || || | || || || || ||||| | || || || | | Sbjct 128129 AATGCAGATCTTCGTCAAGACCTTGACAGGAAAGACGATCACTCTGGAAGTTGAATCATC 128188 Query 38303 CGACA-GCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 |||| | || |||| | |||| || |||| ||||| || || |||||| | ||| Sbjct 128189 GGACACGATTGACAACG--TCAAGAGCAAGATCCAGGACAAGGAAGGTATTCCCCCTGAC 128246 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 ||||| || || || | ||| || || ||| |||| || | ||||| || | ||||||| Sbjct 128247 CAACAACGACTTATCTTCGCTGGTAAGCAGTTGGAGGATGGCCGCACTCTAAGCGACTAC 128306 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||| ||||| |||||||||| |||||||| ||| Sbjct 128307 AACATCCAGAAGGAGTCGACGCTGCACTTGGTGCTTCGT 128345 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || ||||| ||||| ||||||||| | || || ||| || Sbjct 127380 AACATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTGGAGTCC 127439 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 |||||| | | | | | ||| || || | || || || || ||||| | ||| Sbjct 127440 TCCGACACCATCGACAATGTCAAATCGAAGATTCAGGATAAGGAAGGCATTCCTCCTGAC 127499 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| | |||| ||| || || || || || |||| ||||| || | ||||||| Sbjct 127500 CAGCAGCGATTGATTTTCGCTGGAAAGCAACTCGAGGACGGTCGCACTCTGAGCGACTAC 127559 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| || ||||| | || || ||| | || || ||| Sbjct 127560 AACATTCAGAAGGAGTCCACCCTCCATCTCGTCCTTCGT 127598 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/188 (72%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 38248 AAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACA 38307 ||| | |||| || || || || || || ||||||||| |||| || ||| | | |||| Sbjct 127678 AAACAGTCGTCAAGACCCTTACCGGAAAGACCATCACCCTCGAGGTGGAGTCTTCGGACA 127737 Query 38308 GCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAG 38366 | | |||| | || || |||| ||||| ||||| || || ||||||||||| Sbjct 127738 CGATCGACAACG-TCAAGTCGAAGATCCAAGACAAGGAGGGTATCCCTCCCGACCAACAG 127796 Query 38367 CGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATC 38426 || | |||| ||| ||||| ||||| || || | || ||||| |||||||||||| Sbjct 127797 CGATTGATTTTCGCCGGCAAGCAGCTTGAGGATGGCCGAACCCTATCCGACTACAACATT 127856 Query 38427 CAAAAGGA 38434 || ||||| Sbjct 127857 CAGAAGGA 127864 >seq24 Length=497866 Score = 127 bits (140), Expect = 2e-24 Identities = 157/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 38248 AAATA--TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGA 38305 ||||| ||||| || || || |||||||| ||||||||| |||| || ||| | |||| Sbjct 474044 AAATAGCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGA 474103 Query 38306 CAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACA 38365 || | | | | | || || |||| ||||| ||||| || ||| |||||||||| Sbjct 474104 CACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAACA 474163 Query 38366 GCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACAT 38425 ||| || || | ||| || || ||||| || |||| || |||||| |||||||||||| Sbjct 474164 GCGCCTGATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTCTCCGACTACAACAT 474223 Query 38426 CCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| ||||| | || || || |||| || ||| Sbjct 474224 CCAGAAGGAGTCTACCCTCCACCTGGTCCTCCGT 474257 >seq39 Length=331608 Score = 116 bits (128), Expect = 4e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || |||||||| || || |||||| | || || ||| | | | Sbjct 20757 ATGCAGATTTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTGGAGTCTAGC 20816 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || || || | ||||| |||||||| ||| |||||||| Sbjct 20817 GACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGAATCCCCCCCGACCAA 20876 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | ||| ||||| ||||| || |||| || |||||| |||||||||| Sbjct 20877 CAGCGATTAATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGAACCCTCTCCGACTACAAC 20936 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458 ||||| ||||| ||| || || || | ||||| || Sbjct 20937 ATCCAGAAGGAGAGC-ACCCTCCACCTTGTGCTCCG 20971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500170311640320