Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq25 111 1e-18 seq2 107 1e-17 seq16 96.9 3e-14 seq3 87.8 1e-11 seq12 86.0 5e-11 >seq25 Length=493543 Score = 111 bits (122), Expect = 1e-18 Identities = 671/1065 (63%), Gaps = 17/1065 (2%) Strand=Plus/Plus Query 517250 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 517309 || ||| | |||| || || | ||||| |||||||| | ||| || ||||| |||||| Sbjct 274349 TTCTCAACAGCAGAGACGTTGATGATACCGTTGGCATCGACATCGAAAGTGACCTCAATT 274408 Query 517310 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 517369 |||||||| || | | ||||||||||| || || | || | || || ||| Sbjct 274409 TGAGGGACACCACGAGGCGCAGGTGGGATACCGGTCAGCTCGAACTTGCCGAGCAGGTTA 274468 Query 517370 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 517429 || || |||||| || || ||||||||| | | ||||||| || | | || || Sbjct 274469 TTGTCCTTAGTGCGTTGACGCTCACCCTCGTAGACTTGGATAAGCACACCGGGCTGGTTG 274528 Query 517430 TCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATA 517489 || || | || | || || ||| || || ||||| || ||||||| || Sbjct 274529 TCCGAGAAGGTGGAGAAGACCTCGGACTTCTTGGTGGGAATAGTGGTGTTTCGGGGGATG 274588 Query 517490 ATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACT 517549 | |||||||| |||||||| || || || | ||| | || || || | ||| || | Sbjct 274589 AGCTTGGTCATCATACCACCAGCAGTCTCGATACCGATGGATAGCGGGGCGACGTCGAGA 274648 Query 517550 AGGACAATAT--TTTGAAGTTTTTCATC-AGTTTGACCAACAAGAATAGCTGCTTGAATA 517606 || | || | || | | || | | || | |||| || ||||| || || | Sbjct 274649 AGCAGGATCTCGTTGGTCGACTTGGAGCTGGTGTCACCAGAGAGGATAGCAGCCTGGACG 274708 Query 517607 GCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTG 517666 || ||||| || |||||||| ||||| || || | | || || | | || || ||| Sbjct 274709 GCGGCACCGTAGGCAACAGCCTCATCGGGGTTGATGGATTTGTTGGGCTCCTTGCCGTTG 274768 Query 517667 AAAAAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATAC 517725 || | | | | || | ||| || || ||||||| || || || || || || Sbjct 274769 AAGTAGTCGGTGATGAGCT-TCTGAACACGGGGGATACGAGTGGAACCACCGACCAAGAC 274827 Query 517726 AATTTCATGCACCTGTGATTTATCCAGTTTTGAATC--CAATAAAACTTTTTCAACGGGT 517783 ||| || || || || || || || | || | || ||| | || || ||||| Sbjct 274828 AATCTCGTGGACTTGAGACTTGTCAATCTTGGCGTCGGCAAGGACAC--GGTCGACGGGC 274885 Query 517784 TCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTG 517843 | | | || || | || ||||| || |||||| || | || || | Sbjct 274886 TGGATGGTGGATCGGAAGAGATCCTGGCAAAGCTCCTCGAATCGGGCACGGGT--GATGG 274943 Query 517844 ACAT-TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAG 517901 | | || || ||||| || || || | ||| || | ||||| | || |||| || | Sbjct 274944 AGGTGTAGAAGTCAATACCCTCAAATAGAGAGTCGATCTCAATAGAGGTCTGAGCAGAGG 275003 Query 517902 AAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGC-- 517959 | || || | || || ||||| || || || || | || | ||| | || || Sbjct 275004 AGGAAAGAGTGCGCTTGGCACGCTCGCAAGCGGTTCGGAGACGTCGCAGAGCACGGGCGT 275063 Query 517960 TGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAG 518019 || | ||| | ||| | || | || | |||||| || | || | | || || Sbjct 275064 TGGTAGAT--AGATCCTTCTTGTGCTTGCGCTTGAACTCGTTCACGAAGTGGTTGACTAG 275121 Query 518020 ACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAA 518079 ||| || || || |||||||| ||||| | ||| | || | |||| | || | ||| Sbjct 275122 ACGGTTGTCGAAGTCTTCACCACCCAAGTGAGTGTCACCAGCAGTAGACTTAACCTCGAA 275181 Query 518080 AAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAAT 518139 | || || |||| | | |||| ||||| ||| |||||||| | ||| || || Sbjct 275182 GATACCCTCCTCAATGGTTAGGAGAGACACATCGAAGGTACCACCACCAAGATCGAAGAT 275241 Query 518140 AAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGT 518199 || || || || || || || |||||||| || || | ||||| || || Sbjct 275242 GAGAACGTTGCGCTCACCCTCGGCCTTCTTGTCAAGACCGTAGGCGATGGCAGCGGCTGT 275301 Query 518200 TGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGC 518259 || || || || |||| | || || || |||||||| || || || || || || Sbjct 275302 GGGCTCGTTGATGATTCGGAGGACGTTTAGGCCAGCAATGAGACCGGCGTCCTTGGTAGC 275361 Query 518260 TTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304 ||| | || || ||||| || || ||||| ||||| || || || Sbjct 275362 TTGACGCTGAGAGTCGTTGAAGTAGGCAGGTACAGTGATGACAGC 275406 >seq2 Length=1866352 Score = 107 bits (118), Expect = 1e-17 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 || ||||||||||| || || ||||||||||| |||||||| | || | | ||| ||| Sbjct 416925 TTCTCAAGACCATAAGCCAAGGCAGCAGCAGTAGGTTCATTGACAACACGGAGAACGTTA 416984 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 ||||||||||| || || || || || ||||| | ||| || ||||| || || || Sbjct 416985 AGACCAGCAATCTGACCAGCGTCCTTGGTAGCTTGACGTTGGGAGTCGTTGAAGTAGGCG 417044 Query 518288 GGAACAGTAATAACGGCAT 518306 || ||||||| |||||||| Sbjct 417045 GGCACAGTAACAACGGCAT 417063 >seq16 Length=747318 Score = 96.9 bits (106), Expect = 3e-14 Identities = 206/304 (68%), Gaps = 14/304 (5%) Strand=Plus/Plus Query 518027 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 518086 || ||||| ||||| ||||| | || | || | || || || | ||| | ||| Sbjct 279449 TCGAAATCCTCACCACCCAAGTGCGTGTCACCAGCGGTGGCCAAGACCTCGAAGACACCA 279508 Query 518087 TCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAA----G 518142 ||||||| ||||| ||| | |||||| || |||||||| | |||| | | | | Sbjct 279509 TCTTCAATAGACAGAAGGGAGACATCAAAAGTACCACCACCAAGATCATAGACGATGATG 279568 Query 518143 T-ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 518201 | || ||| | |||||| |||||||| || || | ||||||||| || | Sbjct 279569 TGACGCTCACCACCG-GTCTTG-------TCAAGACCGTAGGCGATAGCAGCAGCGGTAG 279620 Query 518202 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 518261 | || |||| ||||| | ||||| ||||||||||| || || || || || || | Sbjct 279621 GCTCGTTAACAATTCGAAGGACATTGAGACCAGCAATGACACCGGCGTCCTTGGTAGCCT 279680 Query 518262 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTA-CTTCTTTA 518320 |||| || ||||| ||||| || || ||||||| ||||||| || | |||||| Sbjct 279681 GTCTCTGGTTGTCGTTGAAATAGGCGGGGACAGTAACGACGGCATGTGTAACCTTCTTGC 279740 Query 518321 CCAA 518324 |||| Sbjct 279741 CCAA 279744 >seq3 Length=1726141 Score = 87.8 bits (96), Expect = 1e-11 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 668849 TTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCT 668908 |||| || || ||||||||| | | || || ||||||||||| ||||||||| | || Sbjct 1580119 TTAAAGGGAAAGGAAGGTCGTTTACGTGGTAACTTGATGGGAAAGCGTGTCGATTTCTCA 1580178 Query 668909 GCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCC 668964 || ||||| || || ||| |||| | |||||| | || ||||||| |||||||| Sbjct 1580179 GCCCGTACTGTCATCACTGGTGATGCAAATATTTCACTTGATGAAGTGGGTGTTCC 1580234 >seq12 Length=989740 Score = 86.0 bits (94), Expect = 5e-11 Identities = 96/126 (76%), Gaps = 2/126 (2%) Strand=Plus/Minus Query 366994 GTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATT 367053 || |||||||| ||||| ||||| ||||| || | ||||| || ||| | ||||||| Sbjct 336151 GTTGTAGCCACTATAGCGTTTGGAATGGGGATCGACAAACCCGACGTTCGTTTTGTTATC 336092 Query 367054 CATTA-TGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCG 367112 ||| | | | | ||||||| ||||||| ||||||||||| | |||| | || ||||| Sbjct 336091 CATCACTCTATC-CCCAAGAGCCTTGAAGGGTATTATCAAGAGACTGGTCGTGCTGGTCG 336033 Query 367113 TGATGG 367118 ||||| Sbjct 336032 GGATGG 336027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780802649928988