Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq10 201 1e-46 seq1 136 5e-27 >seq10 Length=1071462 Score = 201 bits (222), Expect = 1e-46 Identities = 904/1406 (64%), Gaps = 45/1406 (3%) Strand=Plus/Plus Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665 |||| |||||| ||||| ||||||| || || | || ||| || || || | || Sbjct 417076 GAAAGACCACAGCACATGATCATGCGTGTGGCTGTTGGCATCTGGGGCGATAATGTAGAG 417135 Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCCGTGG-TATGTTCATCCACGCAACACCAAC 111724 || | |||| ||| || |||||| | ||| |||| |||||| | || || Sbjct 417136 AAAGTCATTCAGACCTACAACCTTATGTCCAGCAAATAT-TTCACCCACGCTTCTCCTAC 417194 Query 111725 CCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAA 111784 || ||||| ||||| ||||| | || || | || ||| | | | | || Sbjct 417195 TCTTTTCAATGCTGGAACACCCCAGGCGCAGCTGGCATCCTGCTTCTTAGTCGACATGAA 417254 Query 111785 GGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTG 111844 ||| || || | ||||| |||| ||| |||| |||||| ||||| ||| Sbjct 417255 GGAAGACAGTATTGAGGGCATCTACGACACACTCAAGACCTGTGCCATGATCTCCAAGAC 417314 Query 111845 GGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA- 111902 ||||| |||||||| | |||| || || | |||| | ||| || | | Sbjct 417315 AGCTGGAGGTATCGGTCTCAACATTCACCGCATCCGTGCCACT--GGCTCATACATCGCC 417372 Query 111903 GGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 111962 ||||| |||||| || ||||||| | || ||| | || || || ||| ||| || Sbjct 417373 GGTACGAATGGTACCTCTAATGGTATCGTACCCATGTTGCGAGTTTTCAACAACACCGCC 417432 Query 111963 CGCTATGTAAACCAAGCTGGGCGTCGCAAG------GGATCTATCGCAGTCTATCTTGAG 112016 | || || |||| | ||| | |||| || | | || ||||||| || Sbjct 417433 AGATACGTTGACCAGGGTGG---TAACAAGAGGCCCGGTGCCTTTGCTATCTATCTCGAA 417489 Query 112017 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAG 112076 || |||||| |||| || | ||||||||||| | || ||||| ||| | || ||| Sbjct 417490 CCCTGGCACCAGGATGTCTTCGAGTTCCTTGATCTTCGCAAGAACCACGGTAAAGAAGAG 417549 Query 112077 GCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGT 112135 | | |||| |||||||| ||| |||||||||||||| ||||| ||||||||| | || Sbjct 417550 G-TCCGTGCTCGCGATCTTTTCCTTGCTCTCTGGATTCCCGATCTTTTCATGAAGCGTGT 417608 Query 112136 TGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCC-AGACAAGGCACCCGGTCTCTCCGATG 112194 |||| ||| ||| | ||| | ||| | || || || | || || ||||| |||||| Sbjct 417609 TGAGAAGAACGGCGAATGGACCCTCATGTGCCCTAGTGAGTGC-CCGGGTCTTGCCGATG 417667 Query 112195 CCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTG 112254 ||||| || ||||||||| | ||| ||||| |||| |||| |||| | | | Sbjct 417668 TGTACGGTGATGAATTTGAAGCCTTGTACGAGAAGTATGAGGCAGAAGGTCGTG-GTCGC 417726 Query 112255 C-GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGG 112312 | || ||| || | || | | ||| | || ||||| || | || |||||||| || Sbjct 417727 CAGAAGGT-TAAGGCCCAGAAGCTATGGTACGCCATTCTGGAGGCCCAGACCGAGACCGG 417785 Query 112313 TACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGG 112372 | || | ||||||||||| || |||||||| ||||| || || ||||| | || Sbjct 417786 AAATCCCTTCATGCTTTACAAGGATCACTGTAACCGCAAGAGCAACCAGAAGAACCTTGG 417845 Query 112373 TGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGAC 112432 || ||||||||| | || || ||||| | || | | | |||||| Sbjct 417846 AACTATTCGCAGTTCCAACTTGTGCACTGAAATTATCGAGTACTCGGCTCCCGATGAGGT 417905 Query 112433 GGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG-- 112490 || || || ||| | || || | || || || | || || | | | |||| | Sbjct 417906 AGCCGTCTGCAACTTGGCGTCTCTTGCACTGCCGTCATTCGTTGA-CTACA-ACAACGGT 417963 Query 112491 ACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGA 112550 || | ||| | |||| || ||||||||||| | ||||| | ||||| |||||| Sbjct 417964 ACCTATGACTTCCAAAAGCTGCACGAAGTTACCCAGGTCGTCACCCACAACCTGAACAGA 418023 Query 112551 GTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACAC 112607 || ||| || | |||||||| |||| || || || || ||| | ||| Sbjct 418024 ACCATCGATGTCAACTACTACCCCGTTCCTGAG---GCACGCAACAGCAACATGCGCCAC 418080 Query 112608 CGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-- 112665 ||||| || ||||| ||||| || ||||| || | | | ||||| | | | ||| Sbjct 418081 CGTCCTATCGGTCTAGGTGTTCAGGGTCTTGCAG----ACACCTTCTTAG-CACTACGTA 418135 Query 112666 ---CATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATC 112722 ||||||| || ||||| | | | || || || || ||||| || || | Sbjct 418136 TGCCATTTGAGTCTCCGGAAGCCAGACAGTTGAACAAGCAGATTTTCGAGACTATTTACC 418195 Query 112723 ACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTG 112782 | || ||||| || |||| | || |||| || ||| | || || | | Sbjct 418196 ATGCTGCTCTAACTGCCTCCGTGGAGATCGCCAAGGTCGAGGGTACCTACTCGACTTACG 418255 Query 112783 AGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAG- 112841 | || ||||| | ||| || || | || |||| || |||| |||| || | || || Sbjct 418256 AAGGCTCTCCTGTTTCTCAGGGTATCCTCCAATACGACATGT-GGAATGTCACCCCCAGT 418314 Query 112842 CTTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGT 112901 || || || |||| || ||||| | |||||| | | ||| | || ||||| Sbjct 418315 GATCTCTGGGATTGGGCTAGCCTTAAGGAGCAAATCAAGCAACATGGTGTACGAAACAGC 418374 Query 112902 CTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGC 112961 | || | || || ||||| || || ||| | || || ||||||| || |||||| Sbjct 418375 TTGTTAGTTGCTCCTATGCCCACTGCTAGCACTTCCCAGATTCTGGGTAACAACGAATGC 418434 Query 112962 TTTGAACCCTACACGACGAACATCTA 112987 || || ||||||||| |||||||||| Sbjct 418435 TTCGAGCCCTACACGTCGAACATCTA 418460 >seq1 Length=2525816 Score = 136 bits (150), Expect = 5e-27 Identities = 159/212 (75%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 102168 |||||| || |||| ||||| || || |||||| || | ||| || | |||| | | Sbjct 592592 AGTTCCCTGCATTCGCAAGAAGGCCGACTGGGCTCTGCAATGGATTTCTGACAAGAACTC 592533 Query 102169 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 102228 |||||||| |||| ||| | || || || ||| ||||||||||||||| |||| Sbjct 592532 CA-CCTTTGCTCAGCGTCTCATTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCAGTGGTG 592474 Query 102229 CCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 102288 | ||| | | || | ||| | |||||||| ||||| ||||| |||||| |||||||| Sbjct 592473 CATTCGCCTCCATCTTCTGGTTGAAGAAGCGTGGTCTGATGCCCGGTCTCACCTTCTCCA 592414 Query 102289 ACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 ||||||| ||||||||||| ||||| || ||| Sbjct 592413 ACGAGCTCATCTCTCGTGATGAGGGTCTACAC 592382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620739311806560