Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq10 206 3e-48 seq1 89.7 6e-13 >seq10 Length=1071462 Score = 206 bits (228), Expect = 3e-48 Identities = 1044/1642 (64%), Gaps = 49/1642 (3%) Strand=Plus/Minus Query 109408 CGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAG 109467 || ||||| ||||| || || || |||||| |||||| || | |||||| | Sbjct 418805 CGGAGATAGTACATGCCAGTCTTCAGACCAAGCTTCCAGCCGGTGAAATGCATGCTGGTA 418746 Query 109468 AGTTTGGAAAGTGTCGGACTCTC-CATAAACAAGTTCATCGACTGAGACTGATCGATGAA 109526 | ||| | || || ||||| ||| | ||| | ||||| || ||||||| || Sbjct 418745 ATCTTGCCCATAGTGGG-CTCTCTCATGTGAATGTTTAGTGACTGGGATTGATCGACAAA 418687 Query 109527 TCGACCACGATCAGCCGCCATGT---CGATGATACACTTTTGGCTAATTTCCCAGACAGT 109583 |||||| ||||| ||||| | ||||| | | || | |||||||| || || Sbjct 418686 GGCACCACGGTCAGCGGCCATCTGGACGATGGTTCGCTGAGAG---ATTTCCCAAACGGT 418630 Query 109584 CTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGC 109643 |||||| | | |||| || ||||||| ||||| ||||| || ||||| | Sbjct 418629 CTTGTAAAGAGCTTTGAGGTCCGAAGGAATGTTTGGAATGTTCTGAATTGAACCACCTTC 418570 Query 109644 CTTCACCATGAGATCCTTCATCTCTTTC-GACCAGAGACCGACCTTTTTGAGATCGT--- 109699 | ||| | | |||||| || || ||||||||||| | | || || | Sbjct 418569 GGCAATGATGCGGTTCTTCATG-CTGTCAGACCAGAGACCCATGTCAACAAGGTCTTTGA 418511 Query 109700 -CAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATG 109758 |||| | | | ||| || || || || |||||||| || || ||||||| Sbjct 418510 GCAACCA-AGG---GTTAACAACTTGGAACTCGCCAGCAAGGACACGACGAGAGTAGATG 418455 Query 109759 TTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTG 109818 || | ||||||||| ||||| || || ||||| || || || || | |||| ||| ||| Sbjct 418454 TTCGACGTGTAGGGCTCGAAGCATTCGTTGTTACCCAGAATCTGGGAAGTGCTAGCAGTG 418395 Query 109819 GGCATGGGAGCCA-TGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCAT 109877 ||||| ||||| | | | ||| |||||||| | ||| | ||| | |||| | | Sbjct 418394 GGCATAGGAGCAACTAACAAG-CTGTTTCGTACACCATGTTGCTTGATTTGCTC-CTTAA 418337 Query 109878 TGCGT-CCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAA 109936 || ||||||| | || |||| | | || || |||||| || ||| | Sbjct 418336 GGCTAGCCCAATCCCAGAGATCACTGG-----GGGTGAC-ATTCCACATGTCGTATTGGA 418283 Query 109937 GTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCA 109996 | | ||||| || | ||||||| || | | || || ||| | ||||| |||| ||| | Sbjct 418282 GGATACCCTGAGAAACAGGAGAGCCTTCGTAAGTCGAGTAGGTACCCTCGACCTTGGCGA 418223 Query 109997 ACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGA 110056 ||| || || ||| || ||||| || |||||||| ||||| || |||| Sbjct 418222 TCTCCACGGAGGCAGTTAGAGCAGCATGGTAAATAGTCTCGAAAATCTGCTTGTTCAACT 418163 Query 110057 GGCGAGACTCTTCACAGTCGAAGGGAAGACCA----CAAAGAATAAACACATCCGCTAGA 110112 | | | || | | || || || | || | ||||| || || ||| Sbjct 418162 GTCTGGCTTCCGGAGACTCAAATGGCATACGTAGTGCTAAGAAGGTG----TCTGCAAGA 418107 Query 110113 CCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACG 110172 ||||||||||| ||||| || || || || |||||| | || || ||| Sbjct 418106 CCCTGAACACCTAGACCGATAGGACGGTGGCGCATGTTGCTGTTGCGTGCCTCAGGAACG 418047 Query 110173 GGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCA 110232 ||||| ||||| |||||| | || || || | || || || || | ||| Sbjct 418046 GGGTAGTAGTTGACATCGATGGTTCTGTTCAGGTTGTGGGTGACGACCTGGGTAACTTCG 417987 Query 110233 TGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGCAATA 110292 || || || | | | || | || | | | | || || || || |||| | Sbjct 417986 TGCAGCTTTTGGAAGTCATAGGTACCGTTGTTGTAGTCAACGAATGACGGCAGTGCAAGA 417927 Query 110293 GACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACAC 110352 ||||| | ||||| || | ||| || | | ||| || | |||||| || ||| Sbjct 417926 GACGCCAAGTTGCAGACGGCTACCTCATCGGGAGCCGAGTACTCGATAATTTCAGTGCAC 417867 Query 110353 AAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCC 110412 ||||||||||| ||| || | ||||||||| || ||| ||| || |||| Sbjct 417866 AAGTTGGAACTGCGAATAGTTCCAAGGTTCTTCTGGTTGCTCTTGCGGTTACAGTGATCC 417807 Query 110413 TTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA-C 110471 || || |||||| | || | || || || ||||| | || |||||||| | ||||| | Sbjct 417806 TTGTAAAGCATGAAGGGATTTCCGGTCTCGGTCTGGGCCTCCAGAATGGCGTACCATAGC 417747 Query 110472 ATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTC 110531 || | ||| || | | | | ||||||| |||| ||||| ||||||| | Sbjct 417746 TTCTG-GGCCTTAACCTTCTGGCGACCACGACCTTCTGCCTCATACTTCTCGTACAAGGC 417688 Query 110532 CTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGA 110591 |||||||| | ||||||||||| | ||||||| || || || | ||||| Sbjct 417687 TTCAAATTCATCACCGTACACATCGGCAAGACCCGGGCACTCACTAGGGCACATGAGGGT 417628 Query 110592 CCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAA 110651 ||| | || || |||||| | ||||||||| || || |||||||| | || ||| Sbjct 417627 CCATTCGCCGTTCTTCTCAACACGCTTCATGAAAAGATCGGGAATCCAGAGAGCAAGGAA 417568 Query 110652 AAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCAT 110711 ||| || || ||| ||||||| | ||| ||||| ||| || || | || || | Sbjct 417567 AAGATCGCGAGCACGGACCTCTTCTTTACCGTGGTTCTTGCGAAGATCAAGGAACTCGAA 417508 Query 110712 GATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCC------CTTACGACGACC 110765 || |||| |||||| ||||||||||||| ||| | || || ||| || || Sbjct 417507 GACATCCTGGTGCCAGGGTTCGAGATAGATAGCAAAGGCACCGGGCCTCTTGTTACCAC- 417449 Query 110766 CGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATC 110825 |||||| ||| || | || ||| ||||| || | | ||| || | || |||| Sbjct 417448 --CCTGGTCAACGTATCTGGCGGTGTTGTTGAAAACTCGCAACATGGGTACGATACCATT 417391 Query 110826 GGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCAT 110885 || |||||| ||||| || || | ||||||| ||| ||| || | | Sbjct 417390 AGAGGTACCATTCGTACCGGCGATGTATGAGCCAGTGGCACGGATGCGGTGAATGTTGAG 417331 Query 110886 ACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGTACCATAAATAC 110944 ||| ||||| || || ||| || ||||| ||| ||||||| | || || | Sbjct 417330 ACCGATACCTCCAGCTGTCTTGGAGATCATGGCACAGGTCT-TGAGTGTGTCGTAGATGC 417272 Query 110945 CATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCG 111004 | ||||| ||| |||| || | | || ||||| || | || ||| | | || | Sbjct 417271 CCTCAATACTGTCTTCCTTCATGTCGACTAAGAAGCAGGATGCCAGCTGCGCCTGGGGTG 417212 Query 111005 TTCCCGCATTGAAGAGTGTAGG 111026 |||| |||||||| || ||||| Sbjct 417211 TTCCAGCATTGAAAAGAGTAGG 417190 >seq1 Length=2525816 Score = 89.7 bits (98), Expect = 6e-13 Identities = 138/192 (72%), Gaps = 5/192 (3%) Strand=Plus/Plus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || || ||||| |||||||||||||| || |||| || || ||||| || || Sbjct 592383 TGTAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATCAGACCA 592442 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| | ||| ||||||| || ||| |||||||| ||||| ||| Sbjct 592443 CGCTTCTTCAACCAGAAGATGGAGGCGAATGCACCACTGAAGAAGATACCCTCGACAGCA 592502 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC-GAA--CCACTTGAGAGC 119683 ||||| || | ||||||| ||| |||||| ||| |||||| ||| ||| | ||||| Sbjct 592503 GCGAAGGCAATGAGACGCTGAGC-AAAGGTGGAGTTCTTGTCAGAAATCCATTGCAGAGC 592561 Query 119684 CCAGTTGGCCTT 119695 ||||| |||||| Sbjct 592562 CCAGTCGGCCTT 592573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588973069844400