Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq10 210 3e-49 seq1 104 3e-17 >seq10 Length=1071462 Score = 210 bits (232), Expect = 3e-49 Identities = 942/1465 (64%), Gaps = 43/1465 (3%) Strand=Plus/Minus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 |||||||||| ||||||||| || |||||||| || ||||||| || || | ||| Sbjct 418460 TAGATGTTCGACGTGTAGGGCTCGAAGCATTCGTTGTTACCCAGAATCTGGGAAGTGCTA 418401 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 || || ||||| || || | || | ||||| || | ||| | || |||||| | ||| Sbjct 418400 GCAGTGGGCATAGGAGCAACTAACAAGCTGTTTCGTACACCATGTTGCTTGATTTGCTCC 418341 Query 106055 TTGAGAACATCCCAGTCGTAGTTGAGC--TTGGTTTCACCTTCCCACATATCAAATTGAA 106112 || || | |||| || || || | | || | || |||| |||| || |||| | Sbjct 418340 TTAAGGCTAGCCCAATCCCAGA-GATCACTGGGGGTGACATTCC-ACATGTCGTATTGGA 418283 Query 106113 GCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCA 106172 | | || || || ||||| || || | ||| |||| ||| | | | | || | Sbjct 418282 GGATACCCTGAGAAACAGGAGAGCCTTCGTAAGTCGAGTAGGTACCCTCGACCTTGGCGA 418223 Query 106173 ATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCT 106232 || | || || | || || || || || || || || | |||| || Sbjct 418222 TCTCCACGGAGGCAGTTAGAGCAGCATGGTAAATAGTCTCGAAAATCTGCTTGTTCAACT 418163 Query 106233 CCTTGGCTTCATCTGAATCAAATG-----CGTAGCGGCACAAAATAAATACATCCGCGAG 106287 ||||||| || ||||||| ||||| | | || | | || || || Sbjct 418162 GTCTGGCTTCCGGAGACTCAAATGGCATACGTAGTG---CTAAGAAGGTG--TCTGCAAG 418108 Query 106288 ACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-- 106345 ||| |||||||| | ||| ||||| | ||| ||||| || || || || |||| Sbjct 418107 ACCCTGAACACCTAGACCGATAGGACGGTGGCGCATGTTGCTGTTGCGTGC---CTCAGG 418051 Query 106346 -ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGAT 106404 ||||| || | || || ||| || ||| || || | ||| || | || || | Sbjct 418050 AACGGGGTAGTAGTTGACATCGATGGTTCTGTTCAGGTTGTGGGTGACGACCTGGGTAAC 417991 Query 106405 TTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGC 106464 ||| || || |||| | ||| | || | | | | | || | || || || Sbjct 417990 TTCGTGCAGCTTTTGGAAGTCATAGGTACCGTTGTTGTAGTCAACGAATGACGGCAGTGC 417931 Query 106465 GATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGT 106524 | || ||||| ||||| || || |||||| | | | |||||| | |||||| || Sbjct 417930 AAGAGACGCCAAGTTGCAGACGGCTACCTCATCGGGAGCCGAGTACTCGATAATTTCAGT 417871 Query 106525 ACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGC 106584 |||||||||||||| ||| || || | ||||| ||||| ||||| ||| || Sbjct 417870 GCACAAGTTGGAACTGCGAATAGTTCCAAGGTTCTTCTGGTTGCTCTTGCGGTTACAGTG 417811 Query 106585 ATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCA 106644 ||||||||| |||||| |||| | || ||||| ||||| | || ||||| || | ||| Sbjct 417810 ATCCTTGTAAAGCATGAAGGGATTTCCGGTCTCGGTCTGGGCCTCCAGAATGGCGTACCA 417751 Query 106645 CA-CATCGGCGGCTGGTACAA-TGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAG 106702 | | || | | || | ||||| | || || || ||||| ||||| ||| Sbjct 417750 TAGCTTCTGGGCCTTAACCTTCTGGCGAC--CACGACCTTCTGCCTCATACTTCTCGTAC 417693 Query 106703 AGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT-GGACAGAA 106761 | ||||||||| || ||||| | | |||| ||||| || || | || || || | Sbjct 417692 AAGGCTTCAAATTCATCACCGTACACATCGGCAAGACCCGG-GCACTCACTAGGGCACAT 417634 Query 106762 AAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG- 106820 || | ||||| || || |||||| |||||||||||||| || |||||||| || | Sbjct 417633 GAGGGTCCATTCGCCGTTCTTCTCAACACGCTTCATGAAAAGATCGGGAATCCAGAGAGC 417574 Query 106821 ATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGG 106879 | | ||| ||||| | | ||| || ||||||| | ||| ||||| || | |||||| Sbjct 417573 AAGGAAA-AGATCGCGAGCACGGA-CCTCTTCTTTACCGTGGTTCTTGCGAAGATCAAGG 417516 Query 106880 AACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATC----CCTTTCG 106935 ||||| | || |||| |||||| || || ||||||| || | | | ||| | | Sbjct 417515 AACTCGAAGACATCCTGGTGCCAGGGTTCGAGATAGATAGCAAAGGCACCGGGCCTCTTG 417456 Query 106936 ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAAT 106995 ||| | || | || || | || ||| ||| || || || | ||| || | || Sbjct 417455 -TTACCACCCTGGTCAACGTATCTGGCGGTGTTGTTGAAAACTCGCAACATGGGTACGAT 417397 Query 106996 ACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCACATCATGG 107053 ||||| || |||||| || || ||| || ||| | |||| | | || Sbjct 417396 ACCATTAGAGGTACCATTCGTACCGGCGATGTATGAG--CCAGTGGCACGGATGCGGTGA 417339 Query 107054 ATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCA 107113 |||| | || ||||| ||||| ||| ||||| ||||| | | || || | Sbjct 417338 ATGTTGAGACCGATACCTCCAGCTGTCTTGGAGATCATGGCACAGGTCTTGAGTGTGTCG 417279 Query 107114 TAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGT 107173 ||||| || | || ||| ||||| || ||| | |||||| | || ||||| Sbjct 417278 TAGATGCCCTCAATACTGTCTTCCTTCATGTCGACTAAGAAGCAGGATGCCAGCTGCGCC 417219 Query 107174 CTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACA 107231 ||||| ||||||||||| || || || | ||||| |||| ||| ||| ||||| Sbjct 417218 TGGGGTGTTCCAGCATTGAAAAGAGTAGGAGAAGCGTGGGTGAA-ATA-TTTGCTGGACA 417161 Query 107232 TCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACAC 107291 | || ||| |||| | ||| || | | || || |||||| | ||||||| Sbjct 417160 TAAGGTTGTAGGTCTGAATGACTTTCTCTACATTATCGCCCCAGATGCCAACAGCCACAC 417101 Query 107292 GCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCT 107351 |||| | ||||| || ||| |||| | || | ||| |||| | | ||||| | Sbjct 417100 GCATGATCATGTGCTGTGGTCTTTCTACGATCTTCTCATTGAGCTTTAGTAGATAAGACC 417041 Query 107352 TCTCAAGGGTTTTGAGACCAAAGTA 107376 |||| | ||| |||| |||||||| Sbjct 417040 TCTCCAAGGTCTTGAAGCCAAAGTA 417016 >seq1 Length=2525816 Score = 104 bits (114), Expect = 3e-17 Identities = 142/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| ||||||||||| || || || || || || |||||| || || ||||| ||||| Sbjct 592382 GTGTAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATCAGACC 592441 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||||||||| | || | | ||||| || ||||||||||||||| ||| Sbjct 592442 ACGCTTCTTCAACCAGAAGATGGAGGCGAATGCACCACTGAAGAAGATACCCTCGACAGC 592501 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAA-CCATTTCATTG 117463 || || |||| || |||| || |||| | ||| |||| ||| ||||| || | Sbjct 592502 AGCGAAGGCAATGAGACGCTGAGCAAAGGTG-GAGTTCTTGTCAGAAATCCATTGCAGAG 592560 Query 117464 CCCATTTCGCCTTCTT 117479 |||| | |||||||| Sbjct 592561 CCCAGTCGGCCTTCTT 592576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589977864845520