Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq13 127 2e-24 >seq13 Length=940598 Score = 127 bits (140), Expect = 2e-24 Identities = 199/285 (70%), Gaps = 0/285 (0%) Strand=Plus/Plus Query 158406 AGGTGAGTGGGGATTTGACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGG 158465 ||| || ||||| |||||| ||| | || || ||||||||||||| | || |||| Sbjct 836333 AGGAGAATGGGGTGCTGACATCGCTTTCGGAAGCGCGCAAAGGTTTGGTGTACCATTGGG 836392 Query 158466 ATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACC 158525 || ||| ||||| |||||||| ||||| || ||| ||| | ||||| ||||| || Sbjct 836393 ATTCGGGGGTCCGCATGCTGCCTTCTTCGCCGTCCAAGAGAAGCACAAGAGGAAGATGCC 836452 Query 158526 TGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACT 158585 || | | | || ||| |||| | ||| || || || | |||| || Sbjct 836453 CGGACGGCTGATTGGCTTGTCGAAAGATCGACTGGGTGGGAAGGCTTATCGGCTAGCCCT 836512 Query 158586 ACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACA 158645 ||||| |||| |||||||| ||||||| ||||| || ||||| | |||||| |||| Sbjct 836513 GCAGACGCGAGAACAGCATATTCGAAGAGAGAAAGCGACTAGTAATGTGTGCACATCACA 836572 Query 158646 AGCACTGCTGGCTAATATGTCTGGGTTCTATGCAGCATATCATGG 158690 ||||||| |||| |||||| || |||| || |||||||| Sbjct 836573 AGCACTGTTGGCCAATATGAATGCTCTCTACGCGATCTATCATGG 836617 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 157885 GGTCAAGGATACTATGGAAC-CATCACACCCCCAGTCATACAGCGAAACGTTCTTGAGAA 157943 || ||||| ||||||||||| ||| || || | || || || || ||||| || ||||| Sbjct 835782 GGCCAAGGTTACTATGGAACGCAT-ACCCCGGCTGTTATTCAACGGAACGTCCTGGAGAA 835840 Query 157944 TCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGA 158003 || ||||| || ||||| || || || | || || |||||| | ||||| Sbjct 835841 CCCCGCCTGGTATACCAGCTACACCCCTTACCAGCCAGAAATCAGTCAGGGCCGCTTGGA 835900 Query 158004 AGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAACGC 158063 | | | | || | |||||| | | || || || || ||||| |||||||| ||||| Sbjct 835901 ATCCCTTGTTAACTTCCAAACTGTGGTTACGGACCTAACGGGACTTCCGATAGCTAACGC 835960 Query 158064 ATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 ||| || || |||| ||||| || || ||||||||| Sbjct 835961 CAGTCTTTTGGACGAAGGCACTGCCGCCGCCGAAGCAATG 836000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588048274445280