Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq39 100 2e-16 seq16 96.9 2e-15 seq24 84.2 1e-11 >seq39 Length=331608 Score = 100 bits (110), Expect = 2e-16 Identities = 144/201 (72%), Gaps = 8/201 (4%) Strand=Plus/Minus Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844 ||||| || ||||| ||||| ||||| || ||| |||| | || || ||||| || ||| Sbjct 20953 GTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCTTCGAGCTGCTTGCCG 20894 Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904 || || |||| ||| || ||||| | || | ||||||||||| |||||| ||| Sbjct 20893 GCGAAGATTAATCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCCTGAATCTTGGACTTG 20834 Query 34905 ACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAG 34960 || || | ||||| || | | ||| || || | ||| || || || |||||||| Sbjct 20833 AC--AT--TGTCGATAGTGTCGCTAGACTCCACCTCAAGGGTGATAGTCTTACCCGTGAG 20778 Query 34961 AGTCTTCACAAAGATCTGCAT 34981 ||||| || || |||||||| Sbjct 20777 GGTCTTGACGAAAATCTGCAT 20757 >seq16 Length=747318 Score = 96.9 bits (106), Expect = 2e-15 Identities = 141/197 (72%), Gaps = 8/197 (4%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| || || ||||| ||| |||| | || |||||||| || || ||||| Sbjct 128093 TTCCTTCTGGATATTGTAGTCGCTGAGGGTTCGGCCGTCTTCCAGCTGCTTACCCGCAAA 128034 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || ||||| || ||||| | || | ||||||||||| |||||| || || | Sbjct 128033 GATAAGTCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGAATCTTGCTCTTCAC--A 127976 Query 34910 TGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965 | ||||||| || | ||| || || | ||| ||||| || || || ||||||| Sbjct 127975 T--TATCGATGGTGTCTGACGACTCGACCTCTAAGGTGATGGTCTTGCCGGTCAGAGTCT 127918 Query 34966 TCACAAAGATCTGCATA 34982 ||||||||||||||||| Sbjct 127917 TCACAAAGATCTGCATA 127901 Score = 93.3 bits (102), Expect = 3e-14 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| ||||| || ||| |||| |||| || ||||| || ||||| || Sbjct 127864 TCCTTCTGAATGTTGTAGTCGGATAGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAAA 127805 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | ||| || ||||| | || | ||||||||||| |||||| |||||| Sbjct 127804 ATCAATCGCTGTTGGTCGGGAGGGATACCCTCCTTGTCTTGGATCTTCGACTTGACGTTG 127745 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | |||| || | ||| || |||| ||| ||||| ||||| || || ||||| || Sbjct 127744 TCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCTTTCCGGTAAGGGTCTTGAC 127686 >seq24 Length=497866 Score = 84.2 bits (92), Expect = 1e-11 Identities = 132/187 (71%), Gaps = 8/187 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| || ||| |||| | || || ||||| |||||||| || Sbjct 474232 TCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAG 474173 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || || ||||| | || | ||||||||||| ||||| ||||| || Sbjct 474172 ATCAGGCGCTGTTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGAC--AT 474115 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| || | ||| || |||| ||| ||||| || ||||| || ||||| Sbjct 474114 --TGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTT 474057 Query 34967 CACAAAG 34973 ||| ||| Sbjct 474056 CACGAAG 474050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324632025324144