Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq2 129 5e-24 seq25 105 5e-17 seq16 86.0 5e-11 >seq2 Length=1866352 Score = 129 bits (142), Expect = 5e-24 Identities = 116/146 (79%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 |||| | |||| || | ||||| || || || || || ||||| |||||||||||||| Sbjct 417070 GTTAAGAATGCCGTTGTTACTGTGCCCGCCTACTTCAACGACTCCCAACGTCAAGCTACC 417011 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 || || ||||| | |||||||| ||||| ||||| ||| || ||||||||||||||||| Sbjct 417010 AAGGACGCTGGTCAGATTGCTGGTCTTAACGTTCTCCGTGTTGTCAATGAACCTACTGCT 416951 Query 550511 GCTGCACTTGCATATGGACTTGATAA 550536 ||||| | || ||||| ||||| || Sbjct 416950 GCTGCCTTGGCTTATGGTCTTGAGAA 416925 >seq25 Length=493543 Score = 105 bits (116), Expect = 5e-17 Identities = 324/490 (66%), Gaps = 12/490 (2%) Strand=Plus/Minus Query 550053 TTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGG 550112 ||||||| ||||||||||| || |||||| |||| || || || | || | ||||||| Sbjct 275753 TTGAAATCATTGCCAATGACCAGGGTAACCGAACCACACCCTCCTTCGTGGCCTTCACGG 275694 Query 550113 AAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATA 550172 | || || | | || |||||||||| ||||| | || | | | || || || | Sbjct 275693 ACACGGAGCGTCTAATTGGTGATGCCGCAAAGAACCAGGTCGCCATGAACCCCCAGAACA 275634 Query 550173 CTATTTTTGATGCTAAACGTTTAATTGGAAG-AAGTTTTAATGATTCGACTGTTCAGGCA 550231 | | || || ||||| ||| | ||||| | ||||| | | || | |||||||| Sbjct 275633 CCGTCTTCGACGCTAAGCGTCTGATTGGTCGCAAGTTCTCA-GACCCTGAGGTTCAGGCC 275575 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG-C 550290 ||||||||||| | || ||| | | || | ||| || ||| | |||| | | Sbjct 275574 GATATGAAGCACTTCCCCTTCAAGGTCATTGACAAGAATGGCAAGCCTATTGTTGAGGTC 275515 Query 550291 TACTCATGAAGGATCTGTTAAA-CAATTTTCACCAGAACAAATTTCATCTATGGTTTTAA 550349 | | |||| | | || || || | || ||| |||| || |||||||| | | Sbjct 275514 GAGTAC--AAGGGTGAGACCAAGCAGTTCACCCCCGAAGAAATCTCTTCTATGGTCCTCA 275457 Query 550350 TGAAAATGAAACAAACAGCC-AGTGCTT--TTGTTGGTCAAGAAGTTACGGATGCAGTAA 550406 || ||| | || || ||| || ||| ||| || || | | || || | Sbjct 275456 CCAAGATGCGTGAGACCGCTGAGTCCTACCTTGGTGG-CACC--GTCAACAACGCTGTCA 275400 Query 550407 TAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTA 550466 | |||||||| || || || || ||||| || ||||||||||| || || || || | | Sbjct 275399 TCACTGTACCTGCCTACTTCAACGACTCTCAGCGTCAAGCTACCAAGGACGCCGGTCTCA 275340 Query 550467 TTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526 ||||||| || || || || || || ||||| || || || || ||||| | || || | Sbjct 275339 TTGCTGGCCTAAACGTCCTCCGAATCATCAACGAGCCCACAGCCGCTGCCATCGCCTACG 275280 Query 550527 GACTTGATAA 550536 | ||||| || Sbjct 275279 GTCTTGACAA 275270 >seq16 Length=747318 Score = 86.0 bits (94), Expect = 5e-11 Identities = 124/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 550004 GATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATT 550063 || || |||||||||||| ||| |||||||| |||| | || || ||||||||| | Sbjct 280192 GACTTGGGAACCACATATTCTTGCGTTGGTGTGATGCAACAAGGCAAGGTTGAAATTCTA 280133 Query 550064 GCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACAT 550123 | ||| || ||||| ||| ||| ||| || || || ||| | ||||| || || | Sbjct 280132 GTCAACGACCAAGGAAACCGAATTACCCCTTCATACGTTGCCTTCACAGACGAAGAGCGA 280073 Query 550124 TTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATTT 550178 || ||||| || || || ||| | || || || ||||||| || || |||| Sbjct 280072 TTGGTTGGAGACGCTGCCAAACAACAGGCAGCTTCCAATCCTAGGAACACCATTT 280018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029274951965020