Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq16 111 1e-19 seq39 95.1 9e-15 >seq16 Length=747318 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || || || |||||||| || || |||| |||| |||| ||||||||| ||||| Sbjct 128092 TCCTTCTGGATATTGTAGTCGCTGAGGGTTCGGCCGTCTTCCAGCTGCTTACCCGCAAAG 128033 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || ||||||||||| || | ||||| ||||||||||| |||||| || ||| | Sbjct 128032 ATAAGTCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGAATCTTGCTCTTCACATTA 127973 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | ||||||| ||| ||||| | || || || || || |||| ||| || ||| Sbjct 127972 TCGATGGTGTCTGACGACTCGACCTCTAAGGTGATGGTCTTGCCGGTCAGAGTCTTCACA 127913 Query 48756 AAAATCTGCAT 48766 || |||||||| Sbjct 127912 AAGATCTGCAT 127902 >seq39 Length=331608 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || | ||| || | ||| | || || |||||||| || || || ||||| || || Sbjct 20983 CCACCACGTAGGCGGAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 20924 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || |||| |||| || | |||||| ||||| || || | ||||||||| || | ||| Sbjct 20923 AGGGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATTAATCGCTGTTGGTCGGGGGGG 20864 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||||||||| |||||| || ||| | | || || | ||||||| Sbjct 20863 ATTCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCGCTAGACTCCACC 20804 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || || || ||||| | || || || ||||||||||| Sbjct 20803 TCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCAT 20757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380935752214554