Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq10 194 3e-44 seq1 140 6e-28 >seq10 Length=1071462 Score = 194 bits (214), Expect = 3e-44 Identities = 997/1566 (64%), Gaps = 43/1566 (3%) Strand=Plus/Minus Query 212732 GTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTC 212791 |||||||||||| | | ||| || ||| |||| ||||| ||||||||| | | | Sbjct 418677 GTCAGCGGCCATCTGGACGATGGTTCGCTGAGAGATTTCCCAAACGGTCTTGTAAAGAGC 418618 Query 212792 TTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCC-CCTGTGT--ATGGTCAG 212848 |||||||||| || | | || |||||||| | || || ||| | ||| | | Sbjct 418617 TTTGAGGTCCGAAGGAATGTTTGGAATGTTCTGAATTGAACCACCTTCGGCAATGATGCG 418558 Query 212849 CTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGG 212908 | | |||| || |||||| ||| || | ||| |||| || ||| Sbjct 418557 GTTCTT---CATGCTGTCAGACCAGAGACCCATGTCAACAAGGTCTTTGAGCAACCAAGG 418501 Query 212909 GTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGG 212968 ||| || | ||||| || || | || || | | ||| | ||| || |||||||| Sbjct 418500 GTTAACAACTTGGAACTCGCCAGCAAGGACACGACGAGAGTAGATGTTCGACGTGTAGGG 418441 Query 212969 CTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCAC 213028 ||||| || |||||||| ||||||||||| | |||||| || |||||||| ||||| || Sbjct 418440 CTCGAAGCATTCGTTGTTACCCAGAATCTGGGAAGTGCTAGCAGTGGGCATAGGAGCAAC 418381 Query 213029 CAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCA 213088 | | ||||| | || || || | ||| | | ||| ||||| ||||| Sbjct 418380 TAACAAGCTGTTTCGTACACCATGTTGCTTGATTTGCTCCTTAAGGCTAGCCCAATCCCA 418321 Query 213089 TCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCT 213148 || || | | || ||||||||||| | || | ||| || | Sbjct 418320 G---------AGATCACTGGGGGTGACATTCCACATGTCGTATTGGAGGATACCCTGAGA 418270 Query 213149 CACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGC 213208 || || ||| | ||||| ||||||| || | ||||||| | ||| ||| || Sbjct 418269 AACAGGAGAGCCTTCGTAAGTCGAGTAGGTACCCTCGACCTTGGCGATCTCCACGGAGGC 418210 Query 213209 CTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGG 213268 || ||||| | ||| || || || || |||| | |||| | || |||| || || Sbjct 418209 AGTTAGAGCAGCATGGTAAATAGTCTCGAAAATCTGCTTGTTCAACTGTCTGGCTTCCGG 418150 Query 213269 GGACGTGAAGGGCAT-CATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGC 213327 ||| || ||||| | | ||| | ||| || || || ||||| || || | | Sbjct 418149 AGACTCAAATGGCATACGTAGTGC-TAAGAAGGTGTCTGCAAGACCCTGAACACCTAGAC 418091 Query 213328 CGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAG 213386 |||| || | ||| | || ||| ||| | || ||| | |||||| ||||| Sbjct 418090 CGATAGGACGGTGGCGCATGTTGCTGTTGCGTGC-CTCAGGAACGGGGTAGTAGTTGACA 418032 Query 213387 TCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGA 213446 |||||| | |||| |||||| ||||| | || | ||| || | | ||| || || Sbjct 418031 TCGATGGTTCTGTTCAGGTTGTGGGTGACGACCTGGGTAACTTCGTGCAG---CTTTTG- 417976 Query 213447 TTGAACACGTAGCCCCCGTCCT-GCA--CAA--ACTCA-GGCAGGGCGATGCTGGCCAGG 213500 ||| | ||| |||| | | | ||| | | | ||||| || | |||| | Sbjct 417975 --GAAGTCATAGGTACCGTTGTTGTAGTCAACGAATGACGGCAGTGCAAGAGACGCCAAG 417918 Query 213501 TTGCAAACGGCCACCTCCT-GAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCT 213559 ||||| ||||| ||||| | | ||| | | |||||| || || || ||||||| |||| Sbjct 417917 TTGCAGACGGCTACCTCATCGGGAGCC-GAGTACTCGATAATTTCAGTGCACAAGTTGGA 417859 Query 213560 GCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGA-ATCCTTGTAGA 213618 | || || || || ||||||| ||||| ||| ||| | ||| ||||||||| | Sbjct 417858 ACTGCGAATAGTTCCAAGGTTCTTCTGGTTGCTCTT-GCGGTTACAGTGATCCTTGTAAA 417800 Query 213619 GCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGG 213678 ||||| |||| |||||||| ||||| | |||| || | ||| || | | || Sbjct 417799 GCATGAAGGGATTTCCGGTCTCGGTCTGGGCCTCCAGAATGGCGTACCATAGCTTCTGGG 417740 Query 213679 CCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGA 213738 |||| ||| | | | ||| | | | ||||| |||| ||||| | | | | Sbjct 417739 CCTTAACCTTCTGGC-GACCACGACCTTCT--GCCTCATACTTCTCGTACAAGGCTTCAA 417683 Query 213739 ATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGT 213798 |||| | || | || | | || ||||| || || ||||||||| |||| | Sbjct 417682 ATTCATCACCGTACACATCGGCAAGACCCGGGCACTCACTAGGGCACATGAGGGTCCATT 417623 Query 213799 CCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGG 213857 | |||| | |||| || | || |||||| || || || | ||| || || ||| || Sbjct 417622 CGCCGTTCTTCTCA-ACACGCTTCATGAAAAGATCGGGAATCCAGAGAGCAAGGAAAAGA 417564 Query 213858 TCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATG 213917 || | | | ||| || || ||| ||||| ||||| || || || |||| Sbjct 417563 TCGCGAGCACGGACCTCTTCTTTACCGTGGTTCTTGCGAAGATCAAGGAACTCGAAGACA 417504 Query 213918 TCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGG 213974 ||| |||||| || || | ||||| |||||||| || ||||||||| || |||||| Sbjct 417503 TCCTGGTGCCAGGGTTCGAGATAGATAGCAAAGGCACCGGGCCTCTTGTTACCACCCTGG 417444 Query 213975 TCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGT 214034 || || ||||| ||||||| | |||| | |||||| | || || || Sbjct 417443 TCAACGTATCTGGCGGTGTTGTTGAAAACTCGCAACATGGGTACGATACCATTAGAGGTA 417384 Query 214035 CCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATG 214094 || || || || || || || ||||| | ||| | | | | ||| ||| || || Sbjct 417383 CCATTCGTACCGGCGATGTATGAGCCAGTGGCACGGATGCGGTGAATGTTGAGACCGATA 417324 Query 214095 CCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATG 214154 || || || ||||||||||||||| ||| | | | || || |||||| | || Sbjct 417323 CCTCCAGCTGTCTTGGAGATCATGGCACAGGTCTTGAGTGTGTCGTAGATGCCCTCAATA 417264 Query 214155 CTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAG 214214 ||||| || | | || | ||||||||| | ||||| | | || | |||| Sbjct 417263 CTGTCTTCCTTCATGTCGACTAAGAAGCAGGATGCCAGCTGCGCCTGGGGTGTTCCAGCA 417204 Query 214215 TTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCC 214274 |||||||| || || || ||| | | | | ||| | || | || ||||||||| Sbjct 417203 TTGAAAAGAGTAGGAGAAGCGTGGGTGAAATATTTGCTGGACATAAGGTTGTAGGTCTGA 417144 Query 214275 AGGACT 214280 | |||| Sbjct 417143 ATGACT 417138 >seq1 Length=2525816 Score = 140 bits (154), Expect = 6e-28 Identities = 339/506 (67%), Gaps = 13/506 (3%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || | | || |||||||| Sbjct 592079 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAAATGTTCTC 592138 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||||||| ||||||||||| | || ||| | || ||| | |||| | Sbjct 592139 CATGAAGTCGAAGGGGTTGGTAGATCGGTAGACCT-TCTCGTTGCCGAGAGCGACCAGTA 592197 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 || | || |||||| |||||||||||| ||| | || ||||||||| | || | Sbjct 592198 GGCGGTCGGCGACGAACTCGATGTATTGCTTCATCAAATTGGCGTTCATGCCCAGCAGAG 592257 Query 48018 ACAC-GGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 ||| ||||| ||||| || || || |||| || || || || || | ||| Sbjct 592258 -CACAGGGCAGAGCCTCGGTCAGGAATTCCTGTTCGATGGCGACAGCATCTGTGATGATC 592316 Query 48077 TGCTTAACGCGGGACT---CTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 | || | | | || | | | | || ||| ||||| || | || | ||| Sbjct 592317 TTCTGGATGACGTCCTTGCCGGGGCGGTTCTTG---AGGTGTGTGA---ATAGTAGGCAA 592370 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 || ||||| |||| | || || || || ||||||| ||||||||||| |||||| Sbjct 592371 GCGAAGTCAGTGTGTAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCG 592430 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||| | || | || || | |||||| || | ||||| | ||| ||||||||| Sbjct 592431 GGCATCAGACCACGCTTCTTCAACCAGAAGATGGAGGCGAATGCACCACTGAAGAAGATA 592490 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 ||||| || || ||||| || |||| | || | || | | ||||||||| || ||| Sbjct 592491 CCCTCGACAGCAGCGAAGGCAATGAGACGCTGAGCAAAGGTGGAGTTCTTGTCAGAAATC 592550 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTT 48339 || || |||||||| |||||||| Sbjct 592551 CATTGCAGAGCCCAGTCGGCCTTCTT 592576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931528165624320