Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq2 98.7 6e-15 seq16 89.7 3e-12 >seq2 Length=1866352 Score = 98.7 bits (108), Expect = 6e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || ||||||| || || || || || || || ||||||||||| || || || | Sbjct 417063 ATGCCGTTGTTACTGTGCCCGCCTACTTCAACGACTCCCAACGTCAAGCTACCAAGGACG 417004 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || ||||| |||||||| ||| | ||| || | |||||||| || || || || Sbjct 417003 CTGGTCAGATTGCTGGTCTTAACGTTCTCCGTGTTGTCAATGAACCTACTGCTGCTGCCT 416944 Query 474855 TTGCTTATGGTCTTGATAAGAATTCTGAC 474883 | |||||||||||||| ||| | ||||| Sbjct 416943 TGGCTTATGGTCTTGAGAAGGAGGCTGAC 416915 >seq16 Length=747318 Score = 89.7 bits (98), Expect = 3e-12 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 || || |||||||||||||| ||||| | || || || ||||||||||| |||||||| Sbjct 127537 TCCTCGAGTTGCTTTCCAGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTA 127478 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATA 480737 || |||||||| ||||||| || || || || | | |||||||| || Sbjct 127477 TCCTGAATCTTCGATTTGACATTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATG 127418 Query 480738 GTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || ||||| ||||| ||||| || || Sbjct 127417 GTCTTGCCAGTGAGGGTCTTGACGAAGATCTG 127386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268162127848904