Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq10 167 3e-36 seq1 104 3e-17 >seq10 Length=1071462 Score = 167 bits (184), Expect = 3e-36 Identities = 604/926 (65%), Gaps = 33/926 (4%) Strand=Plus/Plus Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGCATCCTCATG 75205 |||||||| |||| ||| | |||| | ||||| | | |||| ||| | || | Sbjct 417016 TACTTTGGCTTCAAGACCTTGGAGAGGTCTTATCTACTAAAGCTCAATGAGAAGATCGTA 417075 Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265 |||| |||||| ||||| ||||||| || || | |||||| || || | | || Sbjct 417076 GAAAGACCACAGCACATGATCATGCGTGTGGCTGTTGGCATCTGGGGCGATAATGTAGAG 417135 Query 75266 TCTGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAA 75323 ||| | |||| ||| || |||||| ||| ||| |||| ||||| | || | Sbjct 417136 AAAGTCATTCAGACCTACAACCTTATGTCCAGCAAA-TAT-TTCACCCACGCTTCTCCTA 417193 Query 75324 CCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACA 75383 | || ||||||||||| ||||| ||||| || | |||||| | ||| || | Sbjct 417194 CTCTTTTCAATGCTGGAACACCCCAGGCGCAGCTGGCATCCTGCTTCTTAGTCGACATGA 417253 Query 75384 AGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGT 75443 |||| ||| || | || ||||| | || || | | ||||| ||||| ||| Sbjct 417254 AGGAAGACAGTATTGAGGGCATCTACGACACACTCAAGACCTGTGCCATGATCTCCAAGA 417313 Query 75444 GGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGG 75502 ||||| ||||| || | |||| || | | |||| | ||| || ||| Sbjct 417314 CAGCTGGAGGTATCGGTCTCAACATTCACCGCATCCGTGCCACTGG--CTCATACATCGC 417371 Query 75503 GGG-ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 75561 || || |||||| || ||||||| | || ||| | || || || ||| ||| || Sbjct 417372 CGGTACGAATGGTACCTCTAATGGTATCGTACCCATGTTGCGAGTTTTCAACAACACCGC 417431 Query 75562 GCGCTATGTAAATCAAGCGGGGCGTCGCAAGGGGTCCA------TCGCGGTCTACTTGGA 75615 | || || | || ||| || |||| || || | || |||| | || Sbjct 417432 CAGATACGTTGACCA---GGGTGGTAACAAGAGGCCCGGTGCCTTTGCTATCTATCTCGA 417488 Query 75616 ACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGA 75675 ||| ||||| ||| || | ||||||||||| | || ||||| ||| | ||||| Sbjct 417489 ACCCTGGCACCAGGATGTCTTCGAGTTCCTTGATCTTCGCAAGAACCACGGTAAAGAAGA 417548 Query 75676 GGCTCGGTG-TAGAGATCTCTTTTCAT-CCCTGTGGATTCCAGACCTTTTCATGAAGCGG 75733 || || ||| | | ||||| ||| | | | || |||||||| || |||||||||||||| Sbjct 417549 GG-TCCGTGCTCGCGATCT-TTTCCTTGCTCTCTGGATTCCCGATCTTTTCATGAAGCGT 417606 Query 75734 GTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCC-AGACAAGGCACCAGGTCTCTCCGA 75792 |||||| || || ||||| | || | || || || | || || ||||| |||| Sbjct 417607 GTTGAGAAGAACGGCGAATGGACCCTCATGTGCCCTAGTGAGTGC-CCGGGTCTTGCCGA 417665 Query 75793 CGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAG----AG 75848 | | ||||| || ||||||||| | ||| |||||||| | || ||| | | Sbjct 417666 TGTGTACGGTGATGAATTTGAAGCCTTGTACGAGAAGTATGAGGCAGAAGGTCGTGGTCG 417725 Query 75849 CCAATGCGACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAG 75907 ||| || || || | | || | | ||| | || ||||| | | ||||| ||| Sbjct 417726 CCA----GAAGGT-TAAGGCCCAGAAGCTATGGTACGCCATTCTGGAGGCCCAGACCGAG 417780 Query 75908 ACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAAT 75967 || |||| || | ||||||||||||||| |||||| ||||| ||||| ||||| Sbjct 417781 ACCGGAAATCCCTTCATGCTTTACAAGGATCACTGTAACCGCAAGAGCAACCAGAAGAAC 417840 Query 75968 TTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGAT 76027 | ||||| || || || || | ||||| |||||| | |||||| | | | ||| Sbjct 417841 CTTGGAACTATTCGCAGTTCCAACTTGTGCACTGAAATTATCGAGTACTCGGCTCCCGAT 417900 Query 76028 GAGACGGCTGTTTGCAATTTGGCATC 76053 ||| || || ||||| ||||| || Sbjct 417901 GAGGTAGCCGTCTGCAACTTGGCGTC 417926 >seq1 Length=2525816 Score = 104 bits (114), Expect = 3e-17 Identities = 142/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGG-TTTGACACAAAGTCTCGCTCCTTCGCCGAGCG 65081 |||||||| | ||||| || ||||| ||| |||| ||| | |||| || |||| Sbjct 592576 AAGAAGGCCGACTGGGCTCTGCAATGGATTTCTGACAAGAACTC-CACCTTTGCTCAGCG 592518 Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTA 65141 || |||| || || ||| ||||||||||||||| || ||||| | | || | Sbjct 592517 TCTCATTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCAGTGGTGCATTCGCCTCCATCTT 592458 Query 65142 TTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCG 65201 |||||||||||||| ||||| ||||| || || |||||| || || || || || || Sbjct 592457 CTGGTTGAAGAAGCGTGGTCTGATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCTCG 592398 Query 65202 AGATGAGGGTCTCCAC 65217 ||||||||||| ||| Sbjct 592397 TGATGAGGGTCTACAC 592382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596566632066240