Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1 114 2e-19 >seq1 Length=2525816 Score = 114 bits (126), Expect = 2e-19 Identities = 87/103 (84%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 1592192 AACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGATC 1592251 |||||||| || |||||| | || | ||| |||| |||||| | || |||||||||||| Sbjct 1933748 AACTACCTGGATATCAAGGCGCTATTGGATGTTGGATGCAAGACCGTTGCCAACATGATC 1933807 Query 1592252 AAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294 ||||||||||| ||||||||||| |||||||| || ||||||| Sbjct 1933808 AAGGGCAAGTCCCCCGAGGAGATTCGCAAGACGTTCAACATCA 1933850 Score = 98.7 bits (108), Expect = 1e-14 Identities = 168/244 (69%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| | || || || Sbjct 592074 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAAATG 592133 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||||| | |||| ||| ||| ||||| | | Sbjct 592134 TTCTCCATGAAGTCGAAGGGGTTGGTAGATCGGTAGACCTTCTCGTTGCCGAGAGCGACC 592193 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 || |||||||||||||| ||||||||||| || ||| | |||||||||||| | Sbjct 592194 AGTAGGCGGTCGGCGACGAACTCGATGTATTGCTTCATCAAATTGGCGTTCATGCCCAGC 592253 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || ||||| | |||| ||| || || | ||||| |||| || || |||| Sbjct 592254 AGAGCACAGGGCAGAGCCTCGGTCAGGAATTCCTGTTCGATGGCGACAGCATCTGTGATG 592313 Query 868931 ATCT 868934 |||| Sbjct 592314 ATCT 592317 Score = 96.9 bits (106), Expect = 4e-14 Identities = 142/197 (72%), Gaps = 13/197 (7%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| || || ||| ||| | |||||| |||| ||| |||||||| || || ||||| Sbjct 592388 ACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATCAGACCACGCTT 592447 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGA--GAAAAAGATGCCCTCGACGGCGGCA 869296 ||| | ||| ||||||| | ||| ||| | | ||| ||||| |||||||| || || Sbjct 592448 CTTCAACCAGAAGATGGAGGCGAA--TGCACCACTGAAGAAGATACCCTCGACAGCAGCG 592505 Query 869297 AAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTG---ATCCACTTCATC 869353 ||| | ||||| |||| ||||||||| ||| | ||||| ||||| | || Sbjct 592506 AAGGCAATGAGACGCTGAGCAAAGGTG--GAG----TTCTTGTCAGAAATCCATTGCAGA 592559 Query 869354 GCCCAGTCGGCCTTTTT 869370 |||||||||||||| || Sbjct 592560 GCCCAGTCGGCCTTCTT 592576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107106538256166