Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq39 132 3e-26 seq16 123 2e-23 seq24 113 3e-20 >seq39 Length=331608 Score = 132 bits (146), Expect = 3e-26 Identities = 162/219 (74%), Gaps = 8/219 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||| | ||||||||||||||| ||||| ||||| || ||| | || | || Sbjct 20968 AGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCT 20909 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||| | ||| || ||||| | || | ||||||||||| Sbjct 20908 TCGAGCTGCTTGCCGGCGAAGATTAATCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCC 20849 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| || | ||||| || | | ||| || |||| ||| || Sbjct 20848 TGAATCTTGGACTTGAC--AT--TGTCGATAGTGTCGCTAGACTCCACCTCAAGGGTGAT 20793 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 ||||| |||||||||||||| || || ||||||||||| Sbjct 20792 AGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCATGAT 20754 >seq16 Length=747318 Score = 123 bits (136), Expect = 2e-23 Identities = 159/217 (73%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | |||| ||||||||||||||| ||||| || |||| | || Sbjct 127594 AGGACGAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGACCGTCC 127535 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||||||||| ||||| |||| ||| |||||||| | || | || ||||| || Sbjct 127534 TCGAGTTGCTTTCCAGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCC 127475 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || |||||| || | ||||| || || ||| || |||| ||| || Sbjct 127474 TGAATCTTCGATTTGAC--AT--TGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGAT 127419 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||||| || ||||||||||| || |||||||||||| Sbjct 127418 GGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATG 127382 Score = 113 bits (124), Expect = 3e-20 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | || ||||||||||||||| ||||| |||||| | || |||| Sbjct 127885 AGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGATAGGGTTCGGCCATCC 127826 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| |||||||| |||| ||| || ||||| | || | ||||||||||| Sbjct 127825 TCAAGCTGCTTGCCGGCGAAAATCAATCGCTGTTGGTCGGGAGGGATACCCTCCTTGTCT 127766 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| || | ||| || || | ||| |||||| Sbjct 127765 TGGATCTTCGACTTGACGTTGTCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATGGTC 127706 Query 34946 TTTCCCGTGAGGGTCTTTAC 34965 ||||| || |||||||| || Sbjct 127705 TTTCCGGTAAGGGTCTTGAC 127686 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| ||||| ||| |||| |||| |||| ||||| || ||||| Sbjct 128321 CTCCTTCTGGATGTTGTAGTCGCTTAGAGTGCGGCCATCCTCCAACTGCTTACCAGCGAA 128262 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| |||||||| ||||| | || | || |||||||| | || || |||||| Sbjct 128261 GATAAGTCGTTGTTGGTCAGGGGGAATACCTTCCTTGTCCTGGATCTTGCTCTTGACGTT 128202 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || | || || || | || || |||||||| || | |||||| || Sbjct 128201 GTCAATCGTGTCCGATGATTCAACTTCCAGAGTGATCGTCTTTCCTGTCAAGGTCTTGAC 128142 Query 34966 AAAGATCTGCAT 34977 ||||||||||| Sbjct 128141 GAAGATCTGCAT 128130 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/216 (70%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || || |||| ||| |||||||| || || ||||| ||| | || | || Sbjct 128113 AGAACGAGATGAAGGGTAGATTCCTTCTGGATATTGTAGTCGCTGAGGGTTCGGCCGTCT 128054 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| || || ||||| ||||| || ||||| | || | ||||||||||| Sbjct 128053 TCCAGCTGCTTACCCGCAAAGATAAGTCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCC 127994 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || || || || ||||||| || | |||||| || | ||| || Sbjct 127993 TGAATCTTGCTCTTCAC--AT--TATCGATGGTGTCTGACGACTCGACCTCTAAGGTGAT 127938 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| || || || ||||| |||||||||||||| Sbjct 127937 GGTCTTGCCGGTCAGAGTCTTCACAAAGATCTGCAT 127902 >seq24 Length=497866 Score = 113 bits (124), Expect = 3e-20 Identities = 151/208 (73%), Gaps = 8/208 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | ||| ||||||||| ||||| ||||| || ||| | || | || Sbjct 474253 AGGACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCC 474194 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||||||||||||||| || || ||||| | || | ||||||||||| Sbjct 474193 TCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGGATACCCTCCTTGTCC 474134 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| || | ||||| || | ||| || || | ||| || Sbjct 474133 TGGATCTTGGACTTGAC--AT--TGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGAT 474078 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAG 34969 |||||| ||||| |||||||| || ||| Sbjct 474077 GGTCTTGCCCGTCAGGGTCTTCACGAAG 474050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325691220186362