Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq16 140 3e-28 seq24 118 1e-21 seq39 105 6e-18 >seq16 Length=747318 Score = 140 bits (154), Expect = 3e-28 Identities = 156/206 (76%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || ||||| |||| || ||| ||| ||||||||| | Sbjct 127586 ATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGACC-GTCCTCGAGTT 127528 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| || ||| |||| | ||||||||||| ||||| ||||||||||| || |||| Sbjct 127527 GCTTTCCAGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGAATCT 127468 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | |||| | || | ||||||| || |||||| || | ||||| ||| ||||| | Sbjct 127467 TCGATTTGACATTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTCTTGCCAG 127408 Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661 | || || || ||||| ||||||||| Sbjct 127407 TGAGGGTCTTGACGAAGATCTGCATG 127382 Score = 111 bits (122), Expect = 2e-19 Identities = 139/188 (74%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| | || | | | ||||| ||||||||||| Sbjct 127870 GTAGACTCCTTCTGAATGTTGTAGTCGGATAGGGTTCGGCCA-TCCTCAAGCTGCTTGCC 127812 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| | ||||| |||||||||||||| || |||||||| |||||| ||| Sbjct 127811 GGCGAAAATCAATCGCTGTTGGTCGGGAGGGATACCCTCCTTGTCTTGGATCTTCGACTT 127752 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | | |||||| |||| ||||| ||| || ||||| || || Sbjct 127751 GACGTTGTCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCTTTCCGGTAAGGGT 127692 Query 133643 TTTTACGA 133650 || |||| Sbjct 127691 CTTGACGA 127684 Score = 105 bits (116), Expect = 6e-18 Identities = 148/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGC 133514 ||| | ||| || || ||||| |||||||| |||| | || || || || || ||| Sbjct 128105 ATGAAGGGTAGATTCCTTCTGGATATTGTAGTCGCTGAGGGTTCGGCCG--TCTTCCAGC 128048 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| ||||| | || || ||||| |||||||| || || || |||||||| ||| Sbjct 128047 TGCTTACCCGCAAAGATAAGTCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGAATC 127988 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | || | ||||| | | ||| || || | ||||| ||| |||||| Sbjct 127987 TTGCTCTTCACATTATCGATGGTGTCTGACGACTCGACCTCTAAGGTGATGGTCTTGCCG 127928 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 |||||||| || || || |||||||| Sbjct 127927 GTCAGAGTCTTCACAAAGATCTGCAT 127902 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| |||| | ||| | | | ||||| | |||||| || Sbjct 128326 GTCGACTCCTTCTGGATGTTGTAGTCGCTTAGAGTGCGGCCA-TCCTCCAACTGCTTACC 128268 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || || || ||||| || || || ||||||||||| |||||| ||| Sbjct 128267 AGCGAAGATAAGTCGTTGTTGGTCAGGGGGAATACCTTCCTTGTCCTGGATCTTGCTCTT 128208 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| |||||| | | || || || | |||| || || || |||| || Sbjct 128207 GACGTTGTCAATCGTGTCCGATGATTCAACTTCCAGAGTGATCGTCTTTCCTGTCAAGGT 128148 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 128147 CTTGACGAAGATCTGCAT 128130 >seq24 Length=497866 Score = 118 bits (130), Expect = 1e-21 Identities = 142/191 (74%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTG 133520 ||| ||||| ||||| || ||||| ||| | || || || |||||||||||||| Sbjct 474239 GGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCG--TCCTCGAGCTGCTTT 474182 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| | || || ||||| |||||||| ||||| || |||||||| |||||| | Sbjct 474181 CCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGAC 474122 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | || | ||||||| | |||||| |||| ||||| ||| ||||| ||||| Sbjct 474121 TTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGG 474062 Query 133641 GTTTTTACGAA 133651 || || ||||| Sbjct 474061 GTCTTCACGAA 474051 >seq39 Length=331608 Score = 105 bits (116), Expect = 6e-18 Identities = 145/201 (72%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTG 133520 |||| ||| ||||| || ||||| ||| | || || || || |||||||||||| Sbjct 20954 GGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCG--TCTTCGAGCTGCTTG 20897 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| | || | ||||| |||||||| ||||| || |||||||| ||||| | Sbjct 20896 CCGGCGAAGATTAATCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCCTGAATCTTGGAC 20837 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | || | |||||| | | |||||| || | ||||| || || || || || Sbjct 20836 TTGACATTGTCGATAGTGTCGCTAGACTCCACCTCAAGGGTGATAGTCTTACCCGTGAGG 20777 Query 133641 GTTTTTACGAAAATCTGCATG 133661 || || ||||||||||||||| Sbjct 20776 GTCTTGACGAAAATCTGCATG 20756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483418394981520