Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq10 116 9e-21 >seq10 Length=1071462 Score = 116 bits (128), Expect = 9e-21 Identities = 230/340 (68%), Gaps = 3/340 (1%) Strand=Plus/Plus Query 110665 CGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAAT 110724 |||| ||| | || | ||| | || || ||||| |||| |||||| |||| || | || Sbjct 417377 CGAATGGTACCTCTAATGGTATCGTACCCATGTTGCGAGTTTTCAACAACACCGCCAGAT 417436 Query 110725 ATGTGAATCAAGGTGGTAA---GAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGC 110781 | || | || |||||||| ||| || | |||||||||||||||||||| |||| Sbjct 417437 ACGTTGACCAGGGTGGTAACAAGAGGCCCGGTGCCTTTGCTATCTATCTCGAACCCTGGC 417496 Query 110782 ATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAG 110841 | ||| | || || ||| | || ||||| || || || || ||||| | | Sbjct 417497 ACCAGGATGTCTTCGAGTTCCTTGATCTTCGCAAGAACCACGGTAAAGAAGAGGTCCGTG 417556 Query 110842 CACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAA 110901 | || ||| | || ||| | |||||| | ||| | |||||||| |||||| | | | Sbjct 417557 CTCGCGATCTTTTCCTTGCTCTCTGGATTCCCGATCTTTTCATGAAGCGTGTTGAGAAGA 417616 Query 110902 ATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGAA 110961 | ||| ||| | || ||||| ||| | | || ||||| | ||||| || || Sbjct 417617 ACGGCGAATGGACCCTCATGTGCCCTAGTGAGTGCCCGGGTCTTGCCGATGTGTACGGTG 417676 Query 110962 AAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGG 111001 | || ||||||| | | ||||| || ||||| |||||| Sbjct 417677 ATGAATTTGAAGCCTTGTACGAGAAGTATGAGGCAGAAGG 417716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186806747996478