Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq16 114 3e-20 >seq16 Length=747318 Score = 114 bits (126), Expect = 3e-20 Identities = 146/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | |||||||| ||||||||| ||||||| ||| || ||| Sbjct 128133 CAGATCTTCGTCAAGACCTTGACAGGAAAGACGATCACTCTGGAAGTTGAATCATCGGAC 128192 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||| || || || ||||| ||| || ||| ||| Sbjct 128193 ACGATTGACAACGTCAAGAGCAAGATCCAGGACAAGGAAGGTATTCCCCCTGACCAACAA 128252 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||||||||||||| || ||||||||||| ||||| | ||| | ||| |||||| || Sbjct 128253 CGACTTATCTTCGCTGGTAAGCAGTTGGAGGATGGCCGCACTCTAAGCGACTACAACATC 128312 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 ||||| ||||| || || ||| Sbjct 128313 CAGAAGGAGTCGACGCTGCAC 128333 Score = 91.5 bits (100), Expect = 3e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || || || ||||| || ||||| | || ||||| ||| ||||| |||| Sbjct 127688 CAAGACCCTTACCGGAAAGACCATCACCCTCGAGGTGGAGTCTTCGGACACGATCGACAA 127747 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| ||||| || || || || || ||| || || | || || Sbjct 127748 CGTCAAGTCGAAGATCCAAGACAAGGAGGGTATCCCTCCCGACCAACAGCGATTGATTTT 127807 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| |||||| | || ||||| | || | |||| |||||| | ||||| ||||| Sbjct 127808 CGCCGGCAAGCAGCTTGAGGATGGCCGAACCCTATCCGACTACAACATTCAGAAGGAGTC 127867 Query 206364 TACTCTTCACCTTGT 206378 |||||| |||||||| Sbjct 127868 TACTCTCCACCTTGT 127882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181814773452558