Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq10 161 1e-34 seq1 86.0 9e-12 >seq10 Length=1071462 Score = 161 bits (178), Expect = 1e-34 Identities = 581/903 (64%), Gaps = 18/903 (2%) Strand=Plus/Minus Query 69516 TTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGA 69575 ||| |||||||| || | ||||| | | || || || ||| | || ||||| | | Sbjct 417687 TTCAAATTCATCACCGTACACATCGGCAAGACCCGGGCACTCACTAGGGCACATGAGGGT 417628 Query 69576 CCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAA 69635 ||| | | | | || ||| || ||||| || |||||||||||||| ||||| | || Sbjct 417627 CCATTCGCCGTTCTTCTCAACACGCTTCATGAAAAGATCGGGAATCCAGAGAGCAAGGAA 417568 Query 69636 GAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCAT 69695 ||||| | | | ||||| || || || || |||||| || ||||| | Sbjct 417567 AAGATCGCGAGCACGGACCTCTTCTTTACCGTGGTTCTTGCGAAGATCAAGGAACTCGAA 417508 Query 69696 AATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCC 69755 | ||| ||||| ||||| ||||| || || | | | || || | || || || || Sbjct 417507 GACATCCTGGTGCCAGGGTTCGAGATAGATAGCAAAGGCACCGGGCCTCTTGTTACCACC 417448 Query 69756 CTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGA 69815 ||| || | ||||||||| ||||| || | |||| || ||| || | ||||||||||| Sbjct 417447 CTGGTCAACGTATCTGGCGGTGTTGTTGAAAACTCGCAACATGGGTACGATACCATTAGA 417388 Query 69816 TTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACC 69875 ||||||| || || | || || || | || || || ||| ||||| Sbjct 417387 GGTACCATTCGTACCGGCGATGTATGAGCCAGTGGCACGGATGCGGTGAATGTTGAGACC 417328 Query 69876 TATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTC 69935 || ||||| || | || ||||| | ||||| || | |||||| || || ||||| Sbjct 417327 GATACCTCCAGCTGTCTTGGAGATCATGGCACAGGTCTTGAGTGTGTCGTAGATGCCCTC 417268 Query 69936 TATGCTATCATCTATCATGT----TAAGAAGAAAACAGCTAGACATTTGATGATGTATAG 69991 || || || || |||||| ||||||| ||| | || || || | Sbjct 417267 AATACTGTCTTCCTTCATGTCGACTAAGAAG----CAGGATGCCAGCTGCGCCTGGGGTG 417212 Query 69992 TTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGT 70051 |||| ||||| || | |||||||| ||||| ||||| |||| || | || |||| Sbjct 417211 TTCCAGCATTGAAAAGAGTAGGAGAAGCGTGGGTGAAATATTTGCTGGACATAAGGTTGT 417152 Query 70052 ATGTTTCAATAGCTGATTCTA---TATC-CCACTGATGAATTCCTATCGCGACACGCATC 70107 | || | ||| || |||| |||| || | |||| || | || |||||||| Sbjct 417151 AGGTCTGAATGACTTTCTCTACATTATCGCCCCAGATG----CCAACAGCCACACGCATG 417096 Query 70108 AACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCC 70167 | ||| ||||| |||| |||||| | || | ||| | || | || || || | ||| Sbjct 417095 ATCATGTGCTGTGGTCTTTCTACGATCTTCTCATTGAGCTTTAGTAGATAAGACCTCTCC 417036 Query 70168 AGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTT 70227 | || || || ||||| || | ||| ||||||| ||||| | ||| | || | Sbjct 417035 AAGGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCGTAGACAATTGCGGAGTCA 416976 Query 70228 AGTTTATCCTTATATTTGGTAACTATATCCATAACAGTAGGT-GAGATAATCGGAGATCG 70286 | | ||||| | | | | || | || | || | | ||||| || ||||| | Sbjct 416975 AAGTCCTCCTTGTGTCTCATGAC-ACATTCGTATGTCTCCTTGGAGATCATAGGAGAGGG 416917 Query 70287 TTTACCATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGttt 70346 || || ||||| |||||||||| | | | ||| || ||| | || | || Sbjct 416916 CTTCATGTTCTTAGGGTTAACATAGTGGTAGAGATCGCTAATGACAGAAGACCATTGCTT 416857 Query 70347 ttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGG 70406 || |||| |||||| | || || | ||| || | || || || |||||||| || || Sbjct 416856 CTTCGTTTGCTTGTGGAGGTTGGACACGGCAATACGTGCGGCAAGGATAGCATAATCCGG 416797 Query 70407 ATG 70409 || Sbjct 416796 GTG 416794 >seq1 Length=2525816 Score = 86.0 bits (94), Expect = 9e-12 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 39602 TGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCG 39661 ||| | || | || ||| ||||||||| ||||| |||||||| | | || | ||| Sbjct 592353 TGTGTGAATAGTAGGCAAGCGAAGTCAGTGTGTAGACCCTCATCACGAGAGATGAGCTCG 592412 Query 39662 TTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAA 39721 || || || ||||| || ||||| ||||||||||| || | ||| || |||| || || Sbjct 592413 TTGGAGAAGGTGAGACCGGGCATCAGACCACGCTTCTTCAACCAGAAGATGGAGGCGAAT 592472 Query 39722 GATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAA 39761 | ||| |||||||| || || || || || || |||| Sbjct 592473 GCACCACTGAAGAAGATACCCTCGACAGCAGCGAAGGCAA 592512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686905382628720