Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq15 118 8e-22 >seq15 Length=888612 Score = 118 bits (130), Expect = 8e-22 Identities = 195/279 (70%), Gaps = 8/279 (3%) Strand=Plus/Plus Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488 || ||||| | || ||||| || || | |||||||| ||||||||||| || ||||| Sbjct 715370 CCAAAAATCATTAACGGTCCCGAGATTCTCAATAAATACGTAGGTCAATCTGAGGAAAAC 715429 Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCA-AAAGTTC 19547 || ||| ||||||| || || ||| ||| | | || | |||| | | | || Sbjct 715430 GTGCGAAAGATGTTTGCAGATGCAGAA-AAGGAGTACAAGGAGAAGGGAGAAGAGAGCGG 715488 Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGGT-- 19605 ||| || || || || | |||||| |||| || |||||||||| |||||| |||| Sbjct 715489 TTTACATATCATTATCTTCGATGAACTGGATGCCGTCTGTAAGCAGAGAGGTAGTGGTAC 715548 Query 19606 ----GTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGT 19661 | | ||| || ||||| ||| |||||||| || || || || | |||||||| Sbjct 715549 AGGAGGGACTGGTGTCGGTGACAGTGTAGTCAATCAGCTTCTTTCGAAGCTTGACGGTGT 715608 Query 19662 TAACCAACTGAATAATATTTTAGTTATTGGCATGACTAA 19700 | || || ||||| ||||| ||||||| ||||| || Sbjct 715609 GGATCAGCTCAATAACATTTTGCTTATTGGTATGACCAA 715647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397454072089990