Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq16 118 9e-22 seq24 84.2 2e-11 >seq16 Length=747318 Score = 118 bits (130), Expect = 9e-22 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || || || |||||||||||||| | | | || ||||||| ||||| ||||| Sbjct 128098 GTAGATTCCTTCTGGATATTGTAGTCGCTGAGGGTTCGGCCGTCTTCCAGCTGCTTACCC 128039 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || || |||||||| || || || | |||||| || || |||||| | ||| Sbjct 128038 GCAAAGATAAGTCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGAATCTTGCTCTTC 127979 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||||| | || || |||| || || | ||||| |||||||| Sbjct 127978 ACATTATCGATGGTGTCTGACGACTCGACCTCTAAGGTGATGGTCTTGCCGGTCAGAGTC 127919 Query 27231 TTCACAAAGATTTGCATA 27248 ||||||||||| |||||| Sbjct 127918 TTCACAAAGATCTGCATA 127901 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | ||| || || || || || ||||||||||| | |||| | || || Sbjct 128338 ACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTTAGAGTGCGGCCATCCTCC 128279 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | ||| ||||| ||| | || || || ||||| || || || | ||| || || || | Sbjct 128278 AACTGCTTACCAGCGAAGATAAGTCGTTGTTGGTCAGGGGGAATACCTTCCTTGTCCTGG 128219 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| | || | | | || | ||||| | | ||||||||| ||||| || | || Sbjct 128218 ATCTTGCTCTTGACGTTGTCAATCGTGTCCGATGATTCAACTTCCAGAGTGATCGTCTTT 128159 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || |||| || || || ||||| ||||| Sbjct 128158 CCTGTCAAGGTCTTGACGAAGATCTGCAT 128130 >seq24 Length=497866 Score = 84.2 bits (92), Expect = 2e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || || || || ||||||||| | | | || |||| |||||||| || ||| Sbjct 474238 GTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCGAGCTGCTTTCCG 474179 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || || |||||||| || || || | |||||| || || ||||||| || Sbjct 474178 GCGAAGATCAGGCGCTGTTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTG 474119 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| | | || || || || || || | ||||||||||| || Sbjct 474118 ACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTC 474059 Query 27231 TTCACAAAG 27239 ||||| ||| Sbjct 474058 TTCACGAAG 474050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424932338802576