Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq10 185 1e-41 seq1 104 3e-17 >seq10 Length=1071462 Score = 185 bits (204), Expect = 1e-41 Identities = 606/921 (66%), Gaps = 23/921 (2%) Strand=Plus/Minus Query 111242 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAT 111301 || ||||| ||||| || || |||||| | | | |||||| | |||||| || || Sbjct 417926 GACGCCAAGTTGCAGACGGCTACCTCATCGGGAGCCGAGTACTCGATAATTTCAGTGCAC 417867 Query 111302 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCC 111361 ||||||||||| ||| || || | ||||| ||||| ||||| ||| || |||| Sbjct 417866 AAGTTGGAACTGCGAATAGTTCCAAGGTTCTTCTGGTTGCTCTTGCGGTTACAGTGATCC 417807 Query 111362 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-C 111420 ||||| |||||| |||| | || ||||| ||||| | | ||||| || | ||| | | Sbjct 417806 TTGTAAAGCATGAAGGGATTTCCGGTCTCGGTCTGGGCCTCCAGAATGGCGTACCATAGC 417747 Query 111421 ATCGGCGGCTGGTACAA-TGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGG 111479 || | | || | ||||| | || || || ||||| ||||| ||| | || Sbjct 417746 TTCTGGGCCTTAACCTTCTGGCGAC--CACGACCTTCTGCCTCATACTTCTCGTACAAGG 417689 Query 111480 CTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT-GGACAGAAAAGA 111538 ||||||| || ||||| | | |||| ||||| || || | || || || | || Sbjct 417688 CTTCAAATTCATCACCGTACACATCGGCAAGACCCGG-GCACTCACTAGGGCACATGAGG 417630 Query 111539 GACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG-ATGA 111597 | ||||| || | |||||| |||||||||||||| || |||||||| || | | | Sbjct 417629 GTCCATTCGCCGTTCTTCTCAACACGCTTCATGAAAAGATCGGGAATCCAGAGAGCAAGG 417570 Query 111598 AAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACT 111656 ||| ||||| | | ||| || ||||||| | ||| ||||| || | |||||||||| Sbjct 417569 AAA-AGATCGCGAGCACGGA-CCTCTTCTTTACCGTGGTTCTTGCGAAGATCAAGGAACT 417512 Query 111657 CCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATC----CCTTTCGACGC 111712 | | || |||| |||||| || || ||||||| || | | | ||| | | Sbjct 417511 CGAAGACATCCTGGTGCCAGGGTTCGAGATAGATAGCAAAGGCACCGGGCCTCTTG-TTA 417453 Query 111713 CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCA 111772 ||| | || | || || | || ||| ||| || || || | ||| || | |||||| Sbjct 417452 CCACCCTGGTCAACGTATCTGGCGGTGTTGTTGAAAACTCGCAACATGGGTACGATACCA 417393 Query 111773 TCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCACATCATGGATGT 111830 | || |||||| || || ||| || ||| | |||| | | || |||| Sbjct 417392 TTAGAGGTACCATTCGTACCGGCGATGTATGAG--CCAGTGGCACGGATGCGGTGAATGT 417335 Query 111831 GCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGA 111890 | || ||||| ||||| ||| ||||| ||||| | | || || | |||| Sbjct 417334 TGAGACCGATACCTCCAGCTGTCTTGGAGATCATGGCACAGGTCTTGAGTGTGTCGTAGA 417275 Query 111891 TACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTG 111950 | || | || ||| ||||| || ||| | |||||| | || ||||| | Sbjct 417274 TGCCCTCAATACTGTCTTCCTTCATGTCGACTAAGAAGCAGGATGCCAGCTGCGCCTGGG 417215 Query 111951 GTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTT 112008 |||| ||||||||||| || || || | ||||| |||| ||| ||| |||||| Sbjct 417214 GTGTTCCAGCATTGAAAAGAGTAGGAGAAGCGTGGGTGAA-ATA-TTTGCTGGACATAAG 417157 Query 112009 GTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCAT 112068 || ||| |||| | ||| || | | || || |||||| | || || ||||| Sbjct 417156 GTTGTAGGTCTGAATGACTTTCTCTACATTATCGCCCCAGATGCCAACAGCCACACGCAT 417097 Query 112069 GAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTC 112128 || ||||| |||||| |||| | || | ||| |||| | | ||||| | |||| Sbjct 417096 GATCATGTGCTGTGGTCTTTCTACGATCTTCTCATTGAGCTTTAGTAGATAAGACCTCTC 417037 Query 112129 AAGGGTTTTGAGACCAAAGTA 112149 | ||| |||| |||||||| Sbjct 417036 CAAGGTCTTGAAGCCAAAGTA 417016 >seq1 Length=2525816 Score = 104 bits (114), Expect = 3e-17 Identities = 142/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 ||| ||||||||||| || || || || || || |||||| ||||| ||||| ||||| Sbjct 592382 GTGTAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATCAGACC 592441 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||||||||| | || | | ||||| || ||||||||||||||| ||| Sbjct 592442 ACGCTTCTTCAACCAGAAGATGGAGGCGAATGCACCACTGAAGAAGATACCCTCGACAGC 592501 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAG-ACTTTGCATCAAACCATTTCATTG 122848 || || |||| || || | || |||| | ||| ||| || || ||||| || | Sbjct 592502 AGCGAAGGCAATGAGACGCTGAGCAAAGGTG-GAGTTCTTGTCAGAAATCCATTGCAGAG 592560 Query 122849 CCCATTTCGCCTTCTT 122864 |||| | |||||||| Sbjct 592561 CCCAGTCGGCCTTCTT 592576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628028875540800