Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq10 167 3e-36 seq1 129 7e-25 >seq10 Length=1071462 Score = 167 bits (184), Expect = 3e-36 Identities = 599/921 (65%), Gaps = 23/921 (2%) Strand=Plus/Minus Query 118716 GACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCAC 118775 ||||||| || || || | |||||| | | | |||||| |||||||| |||||| Sbjct 417926 GACGCCAAGTTGCAGACGGCTACCTCATCGGGAGCCGAGTACTCGATAATTTCAGTGCAC 417867 Query 118776 AAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 118835 ||||| ||||| ||| || || | |||||| || || ||| |||||| |||| Sbjct 417866 AAGTTGGAACTGCGAATAGTTCCAAGGTTCTTCTGGTTGCTCTTGCGGTTACAGTGATCC 417807 Query 118836 TTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-C 118894 |||||||||||| | || | || ||||| || |||| || ||||| || | ||| | | Sbjct 417806 TTGTAAAGCATGAAGGGATTTCCGGTCTCGGTCTGGGCCTCCAGAATGGCGTACCATAGC 417747 Query 118895 ATC-GGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGG 118953 || || | | ||||| | || || ||| |||| ||||| ||| | || Sbjct 417746 TTCTGGGCCTTAACCTTCTGGCG--ACCACGACCTTCTGCCTCATACTTCTCGTACAAGG 417689 Query 118954 CTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAG 119013 ||||||| || ||||| | || | || || || || | ||||| | ||| | Sbjct 417688 CTTCAAATTCATCACCGTACACATCGGCAAGACCCGGGCACTCACTAGGGCACATGAGGG 417629 Query 119014 ACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGA 119073 ||||| || || |||||| ||||||||||| || || || |||||||| || || Sbjct 417628 TCCATTCGCCGTTCTTCTCAACACGCTTCATGAAAAGATCGGGAATCCAGAGAGCAAGGA 417569 Query 119074 AGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCA 119133 | ||||| ||| || | ||||| | || || || || | || | || || | Sbjct 417568 AAAGATCGCGAGCACGGACCTCTTCTTTACCGTGGTTCTTGCGAAGATCAAGGAACTCGA 417509 Query 119134 TGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTACGACGACCA 119189 || |||| |||||| ||||| || || | || | | ||| ||| | |||| Sbjct 417508 AGACATCCTGGTGCCAGGGTTCGAGATAGATAGCAAAGGCACCGGGCCTCTTG-TTACCA 417450 Query 119190 GCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCG 119249 |||||| || || || || ||| ||| || || || | ||| || | |||||||| Sbjct 417449 CCCTGGTCAACGTATCTGGCGGTGTTGTTGAAAACTCGCAACATGGGTACGATACCATTA 417390 Query 119250 GATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTGGATGTGCA 119307 || ||||| || || ||| || ||| | | |||| | || ||| |||| | Sbjct 417389 GAGGTACCATTCGTACCGGCGATGTATGAGCC--AGTGGCACGGATGCGGTGAATGTTGA 417332 Query 119308 TACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCC 119367 ||| ||||| || || ||| ||||| || || | |||| || ||||||| | Sbjct 417331 GACCGATACCTCCAGCTGTCTTGGAGATCATGGCACAGGTCTTGAGTGTGTCGTAGATGC 417272 Query 119368 CATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTG 119427 | || || ||| |||| | ||| | ||||||| | || || | | ||||| Sbjct 417271 CCTCAATACTGTCTTCCTTCATGTCGACTAAGAAGCAGGATGCCAGCTGCGCCTGGGGTG 417212 Query 119428 TACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTGTC 119485 | ||||| ||||| ||||| || | |||||| |||| ||| ||| |||||| || Sbjct 417211 TTCCAGCATTGAAAAGAGTAGGAGAAGCGTGGGTGAA-ATA-TTTGCTGGACATAAGGTT 417154 Query 119486 GTAGGTCTCCAAGAC---GGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCAT 119542 |||||||| | ||| | | | || ||| | || || | | || ||||| Sbjct 417153 GTAGGTCTGAATGACTTTCTCTACATTATCGCCCCAG---ATGCCAACAGCCACACGCAT 417097 Query 119543 AAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTC 119602 | ||||| || ||| |||| | | | ||| |||| | | || ||| | |||| Sbjct 417096 GATCATGTGCTGTGGTCTTTCTACGATCTTCTCATTGAGCTTTAGTAGATAAGACCTCTC 417037 Query 119603 CAAGGTCTTGAGACCAAAATA 119623 ||||||||||| ||||| || Sbjct 417036 CAAGGTCTTGAAGCCAAAGTA 417016 >seq1 Length=2525816 Score = 129 bits (142), Expect = 7e-25 Identities = 118/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||| |||||||| ||||| |||||||| || || |||||| ||||| ||||| ||||| Sbjct 592382 GTGTAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATCAGACC 592441 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 ||||||||||||||||| || | |||| ||| ||||||||| ||||| ||| Sbjct 592442 ACGCTTCTTCAACCAGAAGATGGAGGCGAATGCACCACTGAAGAAGATACCCTCGACAGC 592501 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 ||||| |||| |||||||| |||||||| Sbjct 592502 AGCGAAGGCAATGAGACGCTGAGCAAAGG 592530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618432123284880