Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq10 215 6e-51 seq1 136 5e-27 >seq10 Length=1071462 Score = 215 bits (238), Expect = 6e-51 Identities = 660/998 (66%), Gaps = 32/998 (3%) Strand=Plus/Plus Query 104616 TCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAG 104675 ||||||| || || |||||| |||| || | ||||||||||| | || ||||| | Sbjct 417479 TCTATCTCGAACCCTGGCACCAGGATGTCTTCGAGTTCCTTGATCTTCGCAAGAACCACG 417538 Query 104676 GTGACGAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTC 104734 || | || |||| | |||| |||||||| ||| |||||||||||||| ||||| ||| Sbjct 417539 GTAAAGAAGAGG-TCCGTGCTCGCGATCTTTTCCTTGCTCTCTGGATTCCCGATCTTTTC 417597 Query 104735 ATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCC-AGACAAGGCACCTGG 104793 |||||| | |||||| ||| ||| | ||| | ||| | || || || | || || || Sbjct 417598 ATGAAGCGTGTTGAGAAGAACGGCGAATGGACCCTCATGTGCCCTAGTGAGTGC-CCGGG 417656 Query 104794 TCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGG 104853 ||| |||||| ||||| || ||||||||| | ||| ||||| |||| |||||| Sbjct 417657 TCTTGCCGATGTGTACGGTGATGAATTTGAAGCCTTGTACGAGAAGTATGAGGCAGAAGG 417716 Query 104854 TCGGGCGACTGC-GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAA 104911 ||| | | | | || ||| || | || | | ||| | || ||||| || | || Sbjct 417717 TCGTG-GTCGCCAGAAGGT-TAAGGCCCAGAAGCTATGGTACGCCATTCTGGAGGCCCAG 417774 Query 104912 ACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAA 104971 |||||||| || | || | |||||||||||| || |||||||| ||||| || || Sbjct 417775 ACCGAGACCGGAAATCCCTTCATGCTTTACAAGGATCACTGTAACCGCAAGAGCAACCAG 417834 Query 104972 AAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGAC 105031 ||||| | || || |||||||| | || || ||||| | || | | | Sbjct 417835 AAGAACCTTGGAACTATTCGCAGTTCCAACTTGTGCACTGAAATTATCGAGTACTCGGCT 417894 Query 105032 AAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCA 105091 |||||| || || || ||| | || || | || || || | || || | | Sbjct 417895 CCCGATGAGGTAGCCGTCTGCAACTTGGCGTCTCTTGCACTGCCGTCATTCGTTGA-CTA 417953 Query 105092 GAGACAAAG--ACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAA 105149 | |||| | || | ||| | |||| || ||||||||||| | |||||| | | Sbjct 417954 CA-ACAACGGTACCTATGACTTCCAAAAGCTGCACGAAGTTACCCAGGTCGTCACCCACA 418012 Query 105150 ACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTA 105206 |||| |||||| || ||| || | |||||||| |||| || || || | Sbjct 418013 ACCTGAACAGAACCATCGATGTCAACTACTACCCCGTTCCTGAG---GCACGCAACAGCA 418069 Query 105207 ATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTT 105266 | ||| | |||||||| || ||||| |||||||||||||| || | | | ||||| Sbjct 418070 ACATGCGCCACCGTCCTATCGGTCTAGGTGTTCAGGGTCTTGCAG----ACACCTTCTTA 418125 Query 105267 GTCGCCACG-----CATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGA 105321 | | | ||| ||||||| || ||||| | | | || || || || || Sbjct 418126 G-CACTACGTATGCCATTTGAGTCTCCGGAAGCCAGACAGTTGAACAAGCAGATTTTCGA 418184 Query 105322 GACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATA 105381 ||| || || || || ||||| || ||| | || |||| || ||| | || Sbjct 418185 GACTATTTACCATGCTGCTCTAACTGCCTCCGTGGAGATCGCCAAGGTCGAGGGTACCTA 418244 Query 105382 TGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGG 105441 || | || || ||||| | ||| || || | || |||| || |||| |||| | Sbjct 418245 CTCGACTTACGAAGGCTCTCCTGTTTCTCAGGGTATCCTCCAATACGACATGT-GGAATG 418303 Query 105442 TGAGACCAAG-CTTCACTACGACTGGG-AAGCTCTCAAGGAACGCATCAAGGAGAAGGGT 105499 | | || || || || || |||| ||| || ||||| | |||||| | | ||| Sbjct 418304 TCACCCCCAGTGATCTCTGGGATTGGGCTAGC-CTTAAGGAGCAAATCAAGCAACATGGT 418362 Query 105500 CTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGT 105559 | || ||||| | | | ||||| ||||| || || ||| | || || ||||| Sbjct 418363 GTACGAAACAGCTTGTTAGTTGCTCCTATGCCCACTGCTAGCACTTCCCAGATTCTGGGT 418422 Query 105560 AATAATGAATGCTTTGAACCCTACACGACGAACATCTA 105597 || || |||||||| || ||||||||| |||||||||| Sbjct 418423 AACAACGAATGCTTCGAGCCCTACACGTCGAACATCTA 418460 >seq1 Length=2525816 Score = 136 bits (150), Expect = 5e-27 Identities = 159/212 (75%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 94792 |||||| || |||| ||||| || || |||||| || | ||| || | |||| | | Sbjct 592592 AGTTCCCTGCATTCGCAAGAAGGCCGACTGGGCTCTGCAATGGATTTCTGACAAGAACTC 592533 Query 94793 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 94852 |||||||| |||| ||| | || || || ||| ||||||||||||||| |||| Sbjct 592532 CA-CCTTTGCTCAGCGTCTCATTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCAGTGGTG 592474 Query 94853 CCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 94912 | ||| | | || | ||| | |||||||| ||||| ||||| |||||| |||||||| Sbjct 592473 CATTCGCCTCCATCTTCTGGTTGAAGAAGCGTGGTCTGATGCCCGGTCTCACCTTCTCCA 592414 Query 94913 ACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 ||||||| ||||||||||| ||||| || ||| Sbjct 592413 ACGAGCTCATCTCTCGTGATGAGGGTCTACAC 592382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583257898277520