Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq25 282 1e-70 seq7 143 8e-29 seq16 136 1e-26 seq39 100 9e-16 seq3 98.7 3e-15 seq24 87.8 5e-12 >seq25 Length=493543 Score = 282 bits (312), Expect = 1e-70 Identities = 949/1472 (64%), Gaps = 8/1472 (1%) Strand=Plus/Minus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 |||| | ||||| || || || || || || |||||||| | || | | | |||| | Sbjct 275816 CCGCAGTCGGAATTGACTTGGGCACGACCTACTCTTGTGTAGGCGTCTACCGAGATGACC 275757 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 | | ||||| ||||| ||||| || |||||| |||| || || || | ||| || || | Sbjct 275756 GAATTGAAATCATTGCCAATGACCAGGGTAACCGAACCACACCCTCCTTCGTGGCCTTCA 275697 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 | || || |||||| | ||||||||| | ||||| || || | || || || | | Sbjct 275696 CGGACACGGAGCGTCTAATTGGTGATGCCGCAAAGAACCAGGTCGCCATGAACCCCCAGA 275637 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAAT 349436 | || || || || |||||||| || |||||| | | || || ||| || Sbjct 275636 ACACCGTCTTCGACGCTAAGCGTCTGATTGGTCGCAAGTTCTCAGACCCTGAGGTTCAGG 275577 Query 349437 CTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTG 349496 | ||| | || || || || || | || || | |||| || || || ||| ||| Sbjct 275576 CCGATATGAAGCACTTCCCCTTCAAGGTCATTG-ACAAGAA--TGGCAAGCCTATTGTTG 275520 Query 349497 AGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTT 349556 |||| || || || ||||| || || || ||||||||||| || || ||||| Sbjct 275519 AGGTCGAGTACAAGGGTGAGACCAAGCAGTTCACCCCCGAAGAAATCTCTTCTATGGTCC 275460 Query 349557 TAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTA 349616 | || ||| || | ||||| | || | |||| || || | | ||||| | Sbjct 275459 TCACCAAGATGCGTGAGACCGCTGAGTCCTACCTTGGTGGCACCGTCAACAACGCTGTCA 275400 Query 349617 TTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCA 349676 | |||||||| ||||| || || || | |||||| || || || || || || || Sbjct 275399 TCACTGTACCTGCCTACTTCAACGACTCTCAGCGTCAAGCTACCAAGGACGCCGGTCTCA 275340 Query 349677 TTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATG 349736 |||| || |||| || || |||| || || || ||||| || || || || || || | Sbjct 275339 TTGCTGGCCTAAACGTCCTCCGAATCATCAACGAGCCCACAGCCGCTGCCATCGCCTACG 275280 Query 349737 GGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTA 349796 | ||||| || | | || || || |||| || || ||| | |||||||||| Sbjct 275279 GTCTTGACAAGAAGGCCGAGGGTGAGCGCAACGTTCTCATCTTCGATCTTGGTGGTGGTA 275220 Query 349797 CTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTG 349856 | || ||||| || || ||||| |||| ||||| || || || ||||| | ||||||| Sbjct 275219 CCTTCGATGTGTCTCTCCTAACCATTGAGGAGGGTATCTTCGAGGTTAAGTCTACTGCTG 275160 Query 349857 GTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAG 349916 |||| || || | ||||| ||||| || || || ||||| || || || || || | Sbjct 275159 GTGACACTCACTTGGGTGGTGAAGACTTCGACAACCGTCTAGTCAACCACTTCGTGAACG 275100 Query 349917 AATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTA 349975 | || ||||| ||||| || | ||| | || | | || |||| || || Sbjct 275099 AGTTCAAGCG-CAAGCACAAGAAGGATCTATCTACCAACGCCCGTGCTCTGCGACGTCTC 275041 Query 349976 AGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAA 350035 |||| || || || ||||| ||||| | | || || || | || ||||||||||| Sbjct 275040 CGAACCGCTTGCGAGCGTGCCAAGCGCACTCTTTCCTCCTCTGCTCAGACCTCTATTGAG 274981 Query 350036 ATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAA 350095 || || ||||| ||| || | || |||| | || || || ||||| || || || Sbjct 274980 ATCGACTCTCTATTTGAGGGTATTGACTTCTACACCTCCATCACCCGTGCCCGATTCGAG 274921 Query 350096 GAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGAT 350155 || | || |||||| || || | || || | || || || || | || Sbjct 274920 GAGCTTTGCCAGGATCTCTTCCGATCCACCATCCAGCCCGTCGACCGTGTCCTTGCCGAC 274861 Query 350156 GCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATT 350215 || || || ||| ||| | | || | || || || |||||||| || ||||| Sbjct 274860 GCCAAGATTGACAAGTCTCAAGTCCACGAGATTGTCTTGGTCGGTGGTTCCACTCGTATC 274801 Query 350216 CCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATT 350275 || ||||| || | | | || | || || ||||| || || | ||| || Sbjct 274800 CCCCGTGTTCAGAAGCTCATCACCGACTACTTCAACGGCAAGGAGCCCAACAAATCCATC 274741 Query 350276 AATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAAT 350335 || || ||||| |||||||| || ||||| || || ||||| |||| | ||||| | Sbjct 274740 AACCCCGATGAGGCTGTTGCCTACGGTGCCGCCGTCCAGGCTGCTATCCTCTCTGGTGAC 274681 Query 350336 AAGAGTTCTAA---AATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGA 350392 | || || || | | || | | || || || || | || || || | || Sbjct 274680 ACCAGCTCCAAGTCGACCAACGAGATCCTGCTTCTCGACGTCGCCCCGCTATCCATCGGT 274621 Query 350393 TTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACA 350452 | || ||| |||||| | ||||| || || || |||| | ||| | || || Sbjct 274620 ATCGAGACTGCTGGTGGTATGATGACCAAGCTCATCCCCCGAAACACCACTATTCCCACC 274561 Query 350453 AAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTA 350512 || |||||| | || || || || | || || ||||| | || || ||||| Sbjct 274560 AAGAAGTCCGAGGTCTTCTCCACCTTCTCGGACAACCAGCCCGGTGTGCTTATCCAAGTC 274501 Query 350513 TTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGT 350572 | || ||||| ||| |||||||| || ||||| || || | || || | Sbjct 274500 TACGAGGGTGAGCGTCAACGCACTAAGGACAATAACCTGCTCGGCAAGTTCGAGCTGACC 274441 Query 350573 GAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCA 350632 | || ||||| |||| | || || ||||| ||||| ||| |||||||| | ||| | Sbjct 274440 GGTATCCCACCTGCGCCTCGTGGTGTCCCTCAAATTGAGGTCACTTTCGATGTCGATGCC 274381 Query 350633 AATGGTATTTTAAATGTTACCGCAGTTGaaaa 350664 || ||||| | || || | || ||||| || Sbjct 274380 AACGGTATCATCAACGTCTCTGCTGTTGAGAA 274349 >seq7 Length=1349621 Score = 143 bits (158), Expect = 8e-29 Identities = 336/497 (68%), Gaps = 15/497 (3%) Strand=Plus/Minus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 |||||| ||||||| || || || || || || ||| ||| || || || ||||| Sbjct 397114 GCTGTTGTTACTGTCCCTGCTTACTTCAACGACAACCAACGTCAGGCCACCAAGGATGCC 397055 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || |||| |||| | || || || | || || || ||||||||||| || || || Sbjct 397054 GGTTCCATTTCGGGACTGAACGTGCTCCGTATCATCAACGAACCCACTGCCGCTGCTATC 396995 Query 349730 GCATATGGGCTTGAT---AAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTA 349786 ||||| || || | | || | || | ||| ||| | ||||| | ||| | Sbjct 396994 GCATACGGTCTGGGTTCCAACAAATCCAACAAGGAACGTAATGTCCTTATCTACGATCTT 396935 Query 349787 GGTGGTGGTACTTTTGATGTATCACTAC-TAACACTTGAAGAGGGAATTTTTGAAGTTAA 349845 |||||||||||||| ||||| || || | ||||| | | | || |||| || || Sbjct 396934 GGTGGTGGTACTTTCGATGTGTCTCTTCTTAACA-TCCAGGGTGGTGTTTTCACCGTCAA 396876 Query 349846 AGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCA 349905 || |||||||||||||| |||||||||||| | ||||| |||| ||| || || Sbjct 396875 GGCTACTGCTGGTGATACCCATCTTGGTGGACAGGATTTCGATACCAACCTCCTTGACCA 396816 Query 349906 TTTTGTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGATAATCCTAGAGCAA 349964 || | || || || |||| |||| | || | ||||| | | | || |||| Sbjct 396815 TTGTAAGAAGGAGTTCCAGCG-CAAGACCAAGAAGGATATCTCTGGTGACCCGCGAGCTC 396757 Query 349965 TGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTAC--TACCCA 350022 | || | || | ||||| || || ||||||||||| || | || | || | |||| Sbjct 396756 TCCGAAGACTTCGGACTGCTTGCGAGCGTGCTAAGCGAACCCTGTC--CAACGGTGCCCA 396699 Query 350023 AACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTT--TTCATCTATTACA 350080 |||| | ||||||||||| || ||| |||||| | |||||||| | || || || Sbjct 396698 AACCACCATTGAAATTGACTCGCTTTTCGATGGCGAGGATTTCTTCCTCCA--GATCACC 396641 Query 350081 CGTGCTCGGTTTGAAGA 350097 |||||||| || || || Sbjct 396640 CGTGCTCGTTTCGAGGA 396624 >seq16 Length=747318 Score = 136 bits (150), Expect = 1e-26 Identities = 171/235 (73%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| |||||||||| | || || ||||| || || ||||| || ||||| || | Sbjct 127617 TTTGCATGCCACCACGTAGACGAAGGACGAGATGGAGGGTGGACTCCTTCTGAATGTTGT 127558 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || | || || || || || ||||| |||||||| || || | || ||||| | Sbjct 127557 AGTCGCTCAGAGTGCGACCGTCCTCGAGTTGCTTTCCAGCGAAAATCAATCGCTGCTGGT 127498 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||||||||| ||||| ||||||||||| || | ||| ||||| || || | || || | Sbjct 127497 CAGGAGGAATGCCTTCCTTATCCTGAATCTTCGATTTGACATTGTCGATGGTGTCGGAGG 127438 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || ||||| || | ||||| || || || || || || || |||||||| Sbjct 127437 ACTCCACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 127383 Score = 111 bits (122), Expect = 5e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || ||||| || ||||||||||| || ||||| || || || Sbjct 127904 CATACCACCACGGAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTC 127845 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 |||| ||||| ||||| ||||| || || || || || || | || || || || || Sbjct 127844 GGATAGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAATCGCTGTTGGTCGGG 127785 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || || || || || || || || | || || || || |||| || || | || Sbjct 127784 AGGGATACCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCGATCGTGTCCGAAGACTC 127725 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 || || || || | ||||||||||| || || || || Sbjct 127724 CACCTCGAGGGTGATGGTCTTTCCGGTAAGGGTCTTGAC 127686 >seq39 Length=331608 Score = 100 bits (110), Expect = 9e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||||| | || ||||| || || || ||| || || || || || || || Sbjct 20984 ACCACCACGTAGGCGGAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGA 20925 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | ||||| || ||||| || || || || || ||||||| || || || || || || Sbjct 20924 GAGGGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATTAATCGCTGTTGGTCGGGGGG 20865 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 ||||| || || |||||||| || | || ||||| || || | || | || || Sbjct 20864 GATTCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCGCTAGACTCCAC 20805 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || | ||||| || || || || || || ||||||||||| Sbjct 20804 CTCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCAT 20757 >seq3 Length=1726141 Score = 98.7 bits (108), Expect = 3e-15 Identities = 112/150 (75%), Gaps = 3/150 (2%) Strand=Plus/Minus Query 377446 ATTTCTTCAATGCGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAG 377505 ||||| | || || |||||||| |||| || ||| || || | | ||| | |||| Sbjct 1582454 ATTTCCTTAAGACGAGGCACACCGAGTGTGACGTTC---TTTGACGAGATACCTGTAAAG 1582398 Query 377506 TGGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACG 377565 ||||| ||||| ||||| | || || | ||||||||||||||| ||||| || | || Sbjct 1582397 TGGAAGGTATTCAGAGTCATCTGCGTTGCGGGCTCACCAATTGATTGCGCAGCTAATACA 1582338 Query 377566 CCAACCATTTCTCCAGGATTGACAATAGCC 377595 |||||||| || || |||||||| || ||| Sbjct 1582337 CCAACCATCTCGCCGGGATTGACCATTGCC 1582308 >seq24 Length=497866 Score = 87.8 bits (96), Expect = 5e-12 Identities = 152/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 ||||||||||| | | || || || || || |||||||| || || || || || || Sbjct 474271 ATACCACCACGGAGACGGAGGACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCG 474212 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627 || | ||||| || || || || || ||||| || ||||| || || || || || || Sbjct 474211 GAGAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGGTCGGGG 474152 Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687 || || || || || ||||| || || | || ||||| || || | || || | || Sbjct 474151 GGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCC 474092 Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAA 140728 || || || || | ||||| || || || || || || || Sbjct 474091 ACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 474051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515246673149594