Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq10 201 1e-46 >seq10 Length=1071462 Score = 201 bits (222), Expect = 1e-46 Identities = 474/707 (67%), Gaps = 24/707 (3%) Strand=Plus/Plus Query 53244 AGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACG 53303 |||| ||| || | ||| | || || || || ||||| | || || || ||||| | Sbjct 417146 AGACCTACAACCTTATGTCCAGCAAATATTTCACCCACGCTTCTCCTACTCTTTTCAATG 417205 Query 53304 CTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGA 53363 |||| || || | ||| || | ||||||| | || | |||||||| ||| | Sbjct 417206 CTGGAACACCCCAGGCGCAGCTGGCATCCTGCTTCTTAGTCGACATGAAGGAAGACAGTA 417265 Query 53364 TCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTA 53423 | || ||||||||||| || |||||| |||||| ||||||||| | || |||| Sbjct 417266 TTGAGGGCATCTACGACACACTCAAGACCTGTGCCATGATCTCCAAGACAGCTGGAGGTA 417325 Query 53424 TCGGTATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGC 53482 ||||| || || | | | | ||||||| | ||| || ||| || ||||| || Sbjct 417326 TCGGTCTCAACATTCACCG-CATCCGTGCCACTGGCTCATACATCGCCGGTACGAATGGT 417384 Query 53483 GTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAAC 53542 | | |||| ||||| || ||| | || || ||||||||||| ||| | ||||| || Sbjct 417385 ACCTCTAATGGTATCGTACCCATGTTGCGAGTTTTCAACAACACCGCCAGATACGTTGAC 417444 Query 53543 CAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGAC 53602 ||||||||| ||| | || | || || ||||| ||||| || |||||| || Sbjct 417445 CAGGGTGGTAACAAGAGGCCCGGTGCCTTTGCTATCTATCTCGAACCCTGGCACCAGGAT 417504 Query 53603 ATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGA 53661 | | ||||| || || || || ||| || ||| | |||||| | || ||| || || Sbjct 417505 GTCTTCGAGTTCCTTGATCTTCGCAAGAACCACGGTAAAGAAGAGGTCCG-TGCTCGCGA 417563 Query 53662 CCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGA 53721 || || ||||| |||||||| || || |||||| | || |||||| ||| || Sbjct 417564 TCTTTTCCTTGCTCTCTGGATTCCCGATCTTTTCATGAAGCGTGTTGAGAAGAACGGCGA 417623 Query 53722 GTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTT 53781 ||| ||| |||||||| | |||||||| || || | ||| |||||||| || || Sbjct 417624 ATGGACCCTCATGTGCCCTAGTGAGTGCCCGGGTCTTGCCGATGTGTACGGTGATGAATT 417683 Query 53782 T---------AACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGT 53832 | |||||| |||| || | | | || || || ||| ||||||| Sbjct 417684 TGAAGCCTTGTACGAGAAGTAT--GAGGCA-GAAGGTCGTGGTCGC------CAGAAGGT 417734 Query 53833 CAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTA 53892 ||||| | || ||||| | || || || || |||| ||||| |||| || | Sbjct 417735 TAAGGCCCAGAAGCTATGGTACGCCATTCTGGAGGCCCAGACCGAGACCGGAAATCCCTT 417794 Query 53893 CATGTGCTACAAGGAT-TCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 |||| ||||||||| | || ||| |||||||||||||||||| Sbjct 417795 CATGCTTTACAAGGATCACTGT-AACCGCAAGAGCAACCAGAAGAAC 417840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547213277600400