Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq39 113 3e-20 seq16 93.3 3e-14 >seq39 Length=331608 Score = 113 bits (124), Expect = 3e-20 Identities = 154/212 (73%), Gaps = 16/212 (8%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| ||||||||||| || ||||| || || || || ||||| ||||||| || || Sbjct 20959 TGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCTTCGAGCTGC 20900 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT- 34622 || ||||| || ||||| ||||||||||| || || | |||||||||||| ||||| Sbjct 20899 TTGCCGGCGAAGATTAATCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCCTGAATCTTG 20840 Query 34623 ---TTG-TTTTAACGATAAAATTGTGTCTTCGCT---CTCCACTTCCACGGTTATCGTTT 34675 ||| || ||||| ||| ||||| |||||| || | ||| || || | Sbjct 20839 GACTTGACATTGTCGATA-----GTG---TCGCTAGACTCCACCTCAAGGGTGATAGTCT 20788 Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 |||| || | || || || |||||||||||| Sbjct 20787 TACCCGTGAGGGTCTTGACGAAAATCTGCATG 20756 >seq16 Length=747318 Score = 93.3 bits (102), Expect = 3e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 |||||||| |||||| |||||||| || || || || ||||| | || ||||| || Sbjct 127876 TGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGATAGGGTTCGGCCATCCTCAAGCTGC 127817 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 || ||||| || || || ||||||||||| || || | |||||||||||| |||||| Sbjct 127816 TTGCCGGCGAAAATCAATCGCTGTTGGTCGGGAGGGATACCCTCCTTGTCTTGGATCTT 127758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314728073364734