Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq16 123 2e-23 >seq16 Length=747318 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || || || |||||| | || || ||||| ||||| | || Sbjct 127382 CATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTGGAGTCCTC 127441 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | || || | |||||| || ||||| || || |||||||| || || || || Sbjct 127442 CGACACCATCGACAATGTCAAATCGAAGATTCAGGATAAGGAAGGCATTCCTCCTGACCA 127501 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||| || || | ||| || || ||| | || ||| || || | ||| ||||| Sbjct 127502 GCAGCGATTGATTTTCGCTGGAAAGCAACTCGAGGACGGTCGCACTCTGAGCGACTACAA 127561 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| |||||||| ||| | ||| | || | ||| | || |||||||| Sbjct 127562 CATTCAGAAGGAGTCCACCCTCCATCTCGTCCTTCGTCTACGTGGTGGCAT 127612 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||| || ||| | || ||||| ||||| ||| | || Sbjct 128130 ATGCAGATCTTCGTCAAGACCTTGACAGGAAAGACGATCACTCTGGAAGTTGAATCATCG 128189 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||| | ||||| || || || ||||| ||||| || || || || ||| Sbjct 128190 GACACGATTGACAACGTCAAGAGCAAGATCCAGGACAAGGAAGGTATTCCCCCTGACCAA 128249 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || | || | ||| || || || ||||| || | || | ||| |||||| Sbjct 128250 CAACGACTTATCTTCGCTGGTAAGCAGTTGGAGGATGGCCGCACTCTAAGCGACTACAAC 128309 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || ||||||||||| | || ||||| | ||| | || ||||| Sbjct 128310 ATCCAGAAGGAGTCGACGCTGCACTTGGTGCTTCGTCTCCGTGGTGG 128356 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 27000 GTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAG 27059 || || || || ||||| ||| | || || || || ||||| | || ||| |||| || Sbjct 127686 GTCAAGACCCTTACCGGAAAGACCATCACCCTCGAGGTGGAGTCTTCGGACACGATCGAC 127745 Query 27060 ATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATA 27119 | ||||| || || |||||||| || || || || ||||| |||||||| || || Sbjct 127746 AACGTCAAGTCGAAGATCCAAGACAAGGAGGGTATCCCTCCCGACCAACAGCGATTGATT 127805 Query 27120 TACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAG 27179 | ||||||||| || | || || | ||| | ||||| ||||||||||| |||||| Sbjct 127806 TTCGCCGGCAAGCAGCTTGAGGATGGCCGAACCCTATCCGACTACAACATTCAGAAGGAG 127865 Query 27180 TCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || | || | || | ||| | || ||||| || Sbjct 127866 TCTACTCTCCACCTTGTCCTCCGTCTCCGTGGTGGTAT 127903 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||||||||||||||| | || || | || || || |||| Sbjct 127902 ATGCAGATCTTTGTGAAGACTCTGACCGGCAAGACCATCACCTTAGAGGTCGAGTCGTCA 127961 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || ||||| ||||| || || || || ||||| ||| Sbjct 127962 GACACCATCGATAATGTGAAGAGCAAGATTCAGGACAAGGAGGGTATTCCCCCCGACCAA 128021 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | || || || || |||||||| | ||| | ||| ||||| Sbjct 128022 CAGCGACTTATCTTTGCGGGTAAGCAGCTGGAAGACGGCCGAACCCTCAGCGACTACAAT 128081 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || ||| | ||| | ||| | || | || ||||| || Sbjct 128082 ATCCAGAAGGAATCTACCCTTCATCTCGTTCTCCGACTACGTGGTGGAAT 128131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434916236280960