Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq16 168 2e-36 seq24 154 3e-32 seq39 145 2e-29 >seq16 Length=747318 Score = 168 bits (186), Expect = 2e-36 Identities = 165/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| || |||||||| || || || || | ||||| Sbjct 128341 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTTAGAGTGCGGCCATCC 128282 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| |||||| || ||||||||||| |||||||||||||| |||| |||||||||||| Sbjct 128281 TCCAACTGCTTACCAGCGAAGATAAGTCGTTGTTGGTCAGGGGGAATACCTTCCTTGTCC 128222 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| || || ||||| || |||||| || |||||||||||| Sbjct 128221 TGGATCTTGCTCTTGACGTTGTCAATCGTGTCCGATGATTCAACTTCCAGAGTGATCGTC 128162 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||| || | ||||| || || | ||||||| Sbjct 128161 TTTCCTGTCAAGGTCTTGACGAAGATCTGCATT 128129 Score = 156 bits (172), Expect = 1e-32 Identities = 168/222 (76%), Gaps = 4/222 (2%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| ||||| ||||| || || ||||| || || | ||||| | ||||| Sbjct 127885 AGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGATAGGGTTCGGCCATCC 127826 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| ||||| || | || |||||||| ||||| | || |||||||| Sbjct 127825 TCAAGCTGCTTGCCGGCGAAAATCAATCGCTGTTGGTCGGGAGGGATACCCTCCTTGTCT 127766 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||| ||||| || || |||||||| ||||| ||| Sbjct 127765 TGGATCTTCGACTTGACGTTGTCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATGGTC 127706 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTATGGTTA 211124 ||||| || || ||||| || | ||| ||| ||||||| Sbjct 127705 TTTCCGGTAAGGGTCTTGACGA----CTGTTTTTAATGGTTA 127668 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| |||| || || || ||||| || || || || ||||| || || || ||||| Sbjct 128123 ACGTAGTCGGAGAACGAGATGAAGGGTAGATTCCTTCTGGATATTGTAGTCGCTGAGGGT 128064 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || |||||||||||||| || || |||||||| || |||||||| || |||| || Sbjct 128063 TCGGCCGTCTTCCAGCTGCTTACCCGCAAAGATAAGTCGCTGTTGGTCGGGGGGAATACC 128004 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||| ||||| ||||| || ||||||||||| || || ||||| | Sbjct 128003 CTCCTTGTCCTGAATCTTGCTCTTCACATTATCGATGGTGTCTGACGACTCGACCTCTAA 127944 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || || |||||||| ||||| | |||||| Sbjct 127943 GGTGATGGTCTTGCCGGTCAGAGTCTTCACAAAGATCTGCAT 127902 Score = 140 bits (154), Expect = 8e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || || || |||||||| || || ||||| || || || || | || || Sbjct 127594 AGGACGAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGACCGTCC 127535 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || ||||| || ||||| || | || || ||||||||||||| |||||||| ||| Sbjct 127534 TCGAGTTGCTTTCCAGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCC 127475 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| ||| || || ||||||||||| ||| || ||||| || ||||| ||| Sbjct 127474 TGAATCTTCGATTTGACATTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTC 127415 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || ||||| ||||| || || | |||||| || Sbjct 127414 TTGCCAGTGAGGGTCTTGACGAAGATCTGCATGTT 127380 >seq24 Length=497866 Score = 154 bits (170), Expect = 3e-32 Identities = 156/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || ||||| || |||||||| || || | ||||| | || || Sbjct 474253 AGGACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCC 474194 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| ||||| |||||||| || || | || ||||||||| Sbjct 474193 TCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGGATACCCTCCTTGTCC 474134 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||||||||| || || |||||||| ||||| ||| Sbjct 474133 TGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTC 474074 Query 211083 TTTCCCGTGAGAGTCTTTACAAA 211105 || ||||| || ||||| || || Sbjct 474073 TTGCCCGTCAGGGTCTTCACGAA 474051 >seq39 Length=331608 Score = 145 bits (160), Expect = 2e-29 Identities = 162/215 (75%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||| || ||| ||| || |||||||| || || | ||||| | || ||| Sbjct 20968 AGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCT 20909 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| | || |||||||| || || | ||| ||||||||| Sbjct 20908 TCGAGCTGCTTGCCGGCGAAGATTAATCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCC 20849 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTC---AGAGCTTTCAACCTCGAGAGTGATC 211079 || ||||| || || || ||||| ||||| ||| || ||||| || ||||| Sbjct 20848 TGAATCTTGGACTTGACATTGTCGATAGTGTCGCTAGA---CTCCACCTCAAGGGTGATA 20792 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| |||||||| ||||| || || | |||||| Sbjct 20791 GTCTTACCCGTGAGGGTCTTGACGAAAATCTGCAT 20757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159146089049270