Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq16 109 4e-19 seq39 107 1e-18 >seq16 Length=747318 Score = 109 bits (120), Expect = 4e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| ||||| || ||| | || ||||| ||||||||||| |||||||| || | Sbjct 128129 AATGCAGATCTTCGTCAAGACCTTGACAGGAAAGACGATCACTCTGGAAGTTGAATCATC 128188 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||| | | || || || ||||| |||||| | || || || || Sbjct 128189 GGACACGATTGACAACGTCAAGAGCAAGATCCAGGACAAGGAAGGTATTCCCCCTGACCA 128248 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| || | || || || || || || |||| || | |||||| || |||| ||||| Sbjct 128249 ACAACGACTTATCTTCGCTGGTAAGCAGTTGGAGGATGGCCGCACTCTAAGCGACTACAA 128308 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 128309 CATCCAGAAGGAGTCGAC 128326 >seq39 Length=331608 Score = 107 bits (118), Expect = 1e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||||||||||| || || ||||| || || || || || | Sbjct 20757 ATGCAGATTTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTGGAGTCTAGC 20816 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| | || ||| | || | || ||| ||||| || || | || || || || Sbjct 20817 GACACTATCGACAATGTCAAGTC-CAAGATTCAGGACAAGGAGGGAATCCCCCCCGACCA 20875 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| ||||| || |||||||| || || ||||||| || || | ||| ||||| Sbjct 20876 ACAGCGATTAATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGAACCCTCTCCGACTACAA 20935 Query 23790 CATACAAAAAGAG 23802 ||| || || ||| Sbjct 20936 CATCCAGAAGGAG 20948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338007960442184