Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq16 167 6e-36 seq24 150 4e-31 seq39 122 2e-22 >seq16 Length=747318 Score = 167 bits (184), Expect = 6e-36 Identities = 161/207 (78%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| |||| || || || || || || ||||| || |||| |||||| ||| | || Sbjct 128123 ACGTAGTCGGAGAACGAGATGAAGGGTAGATTCCTTCTGGATATTGTAGTCGCTGAGGGT 128064 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || || ||||| |||||||| || || ||||||||||| ||||||||||| |||||||| Sbjct 128063 TCGGCCGTCTTCCAGCTGCTTACCCGCAAAGATAAGTCGCTGTTGGTCGGGGGGAATACC 128004 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| || ||||| ||||||| |||||||||||||| | || || ||||| Sbjct 128003 CTCCTTGTCCTGAATCTTGCTCTTCACATTATCGATGGTGTCTGACGACTCGACCTCTAA 127944 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698 ||||| |||||||| |||| ||| || Sbjct 127943 GGTGATGGTCTTGCCGGTCAGAGTCTT 127917 Score = 145 bits (160), Expect = 2e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| || || || || || |||| ||||| ||| | ||| | ||||| Sbjct 128341 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTTAGAGTGCGGCCATCC 128282 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||| |||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 128281 TCCAACTGCTTACCAGCGAAGATAAGTCGTTGTTGGTCAGGGGGAATACCTTCCTTGTCC 128222 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || || || ||||| || | ||| || || | ||||||||| Sbjct 128221 TGGATCTTGCTCTTGACGTTGTCAATCGTGTCCGATGATTCAACTTCCAGAGTGATCGTC 128162 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || || ||||| || || | ||| | |||||| Sbjct 128161 TTTCCTGTCAAGGTCTTGACGAAGATCTGCATT 128129 Score = 136 bits (150), Expect = 9e-27 Identities = 143/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||||||||| || || || || | ||||| |||| | |||| ||||| Sbjct 127885 AGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGATAGGGTTCGGCCATCC 127826 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || ||||| || | ||| ||||||||||| || ||||| ||||||||| Sbjct 127825 TCAAGCTGCTTGCCGGCGAAAATCAATCGCTGTTGGTCGGGAGGGATACCCTCCTTGTCT 127766 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||| ||||| || | ||||| || | ||||| ||| Sbjct 127765 TGGATCTTCGACTTGACGTTGTCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATGGTC 127706 Query 225682 TTGCCCGT 225689 || || || Sbjct 127705 TTTCCGGT 127698 Score = 122 bits (134), Expect = 2e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || ||||| ||||| || || || | ||||| ||| || ||| | || || Sbjct 127594 AGGACGAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGACCGTCC 127535 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| |||||||| || | ||| || ||||| || ||||| |||||||| || Sbjct 127534 TCGAGTTGCTTTCCAGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCC 127475 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| || ||| ||||||||||| |||| ||||| || | ||||| ||| Sbjct 127474 TGAATCTTCGATTTGACATTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTC 127415 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| || | || || | ||| | ||||| || Sbjct 127414 TTGCCAGTGAGGGTCTTGACGAAGATCTGCATGTT 127380 >seq24 Length=497866 Score = 150 bits (166), Expect = 4e-31 Identities = 155/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| |||||||| || || || || |||| ||||| |||| | |||| || || Sbjct 474253 AGGACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCC 474194 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || ||||||||||| || ||||| |||||||| Sbjct 474193 TCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGGATACCCTCCTTGTCC 474134 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||||||||| || | ||||| || | ||||| ||| Sbjct 474133 TGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTC 474074 Query 225682 TTGCCCGTCAAAGTTTTTATGAA 225704 |||||||||| || || | ||| Sbjct 474073 TTGCCCGTCAGGGTCTTCACGAA 474051 >seq39 Length=331608 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||||||||| ||| || || |||| ||||| |||| | |||| || ||| Sbjct 20968 AGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCT 20909 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| | ||| ||||||||||| || || || |||||||| Sbjct 20908 TCGAGCTGCTTGCCGGCGAAGATTAATCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCC 20849 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| ||| ||||| ||||| | ||||| || | ||||| ||| Sbjct 20848 TGAATCTTGGACTTGACATTGTCGATAGTGTCGCTAGACTCCACCTCAAGGGTGATAGTC 20789 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||| | || || | ||| | ||||| Sbjct 20788 TTACCCGTGAGGGTCTTGACGAAAATCTGCAT 20757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192525118836212