Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq10 201 2e-46 >seq10 Length=1071462 Score = 201 bits (222), Expect = 2e-46 Identities = 593/905 (66%), Gaps = 22/905 (2%) Strand=Plus/Minus Query 77924 TTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGA 77983 |||||||||||| || | ||||| | | || ||||| ||| | |||||||| | | Sbjct 417687 TTCAAATTCATCACCGTACACATCGGCAAGACCCGGGCACTCACTAGGGCACATGAGGGT 417628 Query 77984 CCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAA 78043 ||| || || | | || ||| || ||||| || ||||| || ||||| ||||||| || Sbjct 417627 CCATTCGCCGTTCTTCTCAACACGCTTCATGAAAAGATCGGGAATCCAGAGAGCAAGGAA 417568 Query 78044 TAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCAT 78103 ||||| || | | ||||| || || ||||| |||||| || ||||| | Sbjct 417567 AAGATCGCGAGCACGGACCTCTTCTTTACCGTGGTTCTTGCGAAGATCAAGGAACTCGAA 417508 Query 78104 AATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCC 78163 | ||| ||||| ||||| ||||| || || | | || || | || ||||| || Sbjct 417507 GACATCCTGGTGCCAGGGTTCGAGATAGATAGCAAAGGCACCGGGCCTCTTGTTACCACC 417448 Query 78164 CTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGA 78223 ||| || | |||||||||||||| || |||||| |||||| || | ||||| ||||| Sbjct 417447 CTGGTCAACGTATCTGGCGGTGTTGTTGAAAACTCGCAACATGGGTACGATACCATTAGA 417388 Query 78224 TGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCC 78283 || ||||| || || | || || ||| | || || || |||| | || Sbjct 417387 GGTACCATTCGTACCGGCGATGTATGAGCCAGTGGCACGGATGCGGTGAATGTTGAGACC 417328 Query 78284 TATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTC 78343 || ||||| || |||| || || | || || || | ||| |||||||| ||||| Sbjct 417327 GATACCTCCAGCTGTCTTGGAGATCATGGCACAGGTCTTGAGTGTGTCGTAGATGCCCTC 417268 Query 78344 TATACTGTCATCCATCATGT----TAAGAAGAAAACAGCTAGACATTTGATGATGAACAG 78399 |||||||| ||| |||||| ||||||| ||| | || || || | Sbjct 417267 AATACTGTCTTCCTTCATGTCGACTAAGAAG----CAGGATGCCAGCTGCGCCTGGGGTG 417212 Query 78400 TTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGT 78459 |||| ||||| || | || ||||| || || || || |||| || | || |||| Sbjct 417211 TTCCAGCATTGAAAAGAGTAGGAGAAGCGTGGGTGAAATATTTGCTGGACATAAGGTTGT 417152 Query 78460 ATGTTTCAATAGCTGATTCTA---TGTC-CCATTGATGAATTCCTACCGCTACACGCATC 78515 | || | ||| || |||| | || || |||| || || || |||||||| Sbjct 417151 AGGTCTGAATGACTTTCTCTACATTATCGCCCCAGATG----CCAACAGCCACACGCATG 417096 Query 78516 AACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCC 78575 | ||| ||||| |||||||| || |||| | ||| | || | | || || | ||| Sbjct 417095 ATCATGTGCTGTGGTCTTTCTACGATCTTCTCATTGAGCTTTAGTAGATAAGACCTCTCC 417036 Query 78576 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTT 78635 || || || || ||||| || | ||| ||||||| ||||| | ||| | || | Sbjct 417035 AAGGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCGTAGACAATTGCGGAGTCA 416976 Query 78636 AGTTTATCTTTGTATTTGGTAACA-ATATCCATGACAGTAGTT-GAAATAATAGGAGATC 78693 | | || |||| | | | ||| || ||| | | || || || |||||||| Sbjct 416975 AAGTCCTCCTTGTGTCTCATGACACATTCGTATGTC--TCCTTGGAGATCATAGGAGAGG 416918 Query 78694 G-TACACCATTTTTAGGATTAACATAGTTAAATAAATCTTCCATTACATCACTAAATAGt 78752 | | || || ||||| |||||||||| | | ||| || ||| | || | Sbjct 416917 GCTTCA-TGTTCTTAGGGTTAACATAGTGGTAGAGATCGCTAATGACAGAAGACCATTGC 416859 Query 78753 ttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCA 78812 || || |||| |||||| || || || || || || | ||| || || ||||||||||| Sbjct 416858 TTCTTCGTTTGCTTGTGGAGGTTGGACACGGCAATACGTGCGGCAAGGATAGCATAATCC 416799 Query 78813 GGATG 78817 || || Sbjct 416798 GGGTG 416794 Score = 123 bits (136), Expect = 3e-23 Identities = 350/535 (65%), Gaps = 7/535 (1%) Strand=Plus/Minus Query 76812 GTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTT 76871 ||||| ||||||||||| ||||| || ||||| || |||| ||| |||||||||||| Sbjct 418808 GTACGGAGATAGTACATGCCAGTCTTCAGACCAAGCTTCCAGCCGGTGAAATGCATGCTG 418749 Query 76872 GTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATG 76931 || | ||| | | || || || ||||| || | ||||| |||||||| Sbjct 418748 GTAATCTTGCCCATAGTGGGCTCTCTCATGTGAATGTTTAGTGACTGGGATTGATCGACA 418689 Query 76932 AAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTT 76991 || || || | ||||| ||||| | | ||||| |||| |||||||||| || Sbjct 418688 AAGGCACCACGGTCAGCGGCCATCTGGACGATGGTTCGCTGAGAGATTTCCCAAACGGTC 418629 Query 76992 TTGAAAACTTGTTTGATATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCATCT 77048 ||| ||| ||||| || |||| ||||| | || ||||| |||||||| || Sbjct 418628 TTGTAAAGAGCTTTGAGGTCCGAAGGAATGTTTGGAATGTTCTGAATTGAACCACCTTCG 418569 Query 77049 GATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGG 77108 | || || ||||| || ||| ||| | | | || | || | || Sbjct 418568 GCAATGATGCGGTTCTTCATGCTGTCAGACCAGAGACCCATGTCAACAAGGTCTTTGAGC 418509 Query 77109 AGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTG 77168 | ||| ||||| | ||| || || |||| | || | ||||| ||| || || Sbjct 418508 AACCAAGGGTTAACAACTTGGAACTCGCCAGCAAGGACACGACGAGAGTAGATGTTCGAC 418449 Query 77169 GTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATA 77228 || || || || | |||| ||||| |||| ||| || | ||| |||||| |||||| Sbjct 418448 GTGTAGGGCTCGAAGCATTCGTTGTTACCCAGAATCTGGGAAGTGCTAGCAGTGGGCATA 418389 Query 77229 GGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTC 77288 || || || || || || |||| | ||||||| |||||| || || || | Sbjct 418388 GGAGCAACTAACAAGCTGTTTCGTACACCATGTTGCTTGATTTGCTCCTTAAGGCTAGCC 418329 Query 77289 CAATCCCAAAGAT--CTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCC 77341 |||||||| |||| ||| ||| |||| ||| | |||||||| || || || Sbjct 418328 CAATCCCAGAGATCACTGGGGGT--GACATTCCACATGTCGTATTGGAGGATACC 418276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694665344022720