Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq24 122 2e-22 seq39 109 1e-18 seq16 109 1e-18 >seq24 Length=497866 Score = 122 bits (134), Expect = 2e-22 Identities = 156/213 (73%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| || || || |||||||| || ||||||||||| |||| | |||| Sbjct 474260 GAGACGGAGGACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCG 474201 Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || || || || ||||| ||||||||||| || | ||| ||||| | | ||| || Sbjct 474200 GCCGTCCTCGAGCTGCTTT--CCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGGATACCC 474143 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| || || || || |||||| | || | | |||| ||| ||| || || || Sbjct 474142 TCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGG 474083 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096 || || || |||||||| || |||||||||||| Sbjct 474082 GTGATGGTCTTGCCCGTCAGGGTCTTCACGAAG 474050 >seq39 Length=331608 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| ||||| || || || ||| || ||||||||||| |||| | |||| || || Sbjct 20969 GAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTC 20910 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || || ||||||||||| | | ||| ||||| | | |||||| ||||| || Sbjct 20909 TTCGAGCTGCTTGCCGGCGAAGATTAATCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTC 20850 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||||| || |||||| | || | |||| | ||| || ||||| || ||||| Sbjct 20849 CTGAATCTTGGACTTGACATTGTCGATAGTGTCGCTAGACTCCACCTCAAGGGTGATAGT 20790 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| ||||| ||||| | |||||| Sbjct 20789 CTTACCCGTGAGGGTCTTGACGAAAATCTGCAT 20757 >seq16 Length=747318 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||| ||| || |||||||| ||||| || || ||||| ||||| ||| | |||| Sbjct 128119 AGTCGGAGAACGAGATGAAGGGTAGATTCCTTCTGGATATTGTAGTCGCTGAGGGTTCGG 128060 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 || ||||| || || || || |||||||| | ||| ||||| | | || || ||| Sbjct 128059 CCGTCTTCCAGCTGCTTACCCGCAAAGATAAGTCGCTGTTGGTCGGGGGGAATACCCTCC 128000 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || ||||| || || ||| | || | | ||||||| ||| || || | || Sbjct 127999 TTGTCCTGAATCTTGCTCTTCACATTATCGATGGTGTCTGACGACTCGACCTCTAAGGTG 127940 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || ||||||||||| |||| |||||| Sbjct 127939 ATGGTCTTGCCGGTCAGAGTCTTCACAAAGATCTGCAT 127902 Score = 102 bits (112), Expect = 2e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||||||||| || ||||||||||| || || |||||||| |||| || |||| Sbjct 127892 GAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGATAGGGTTCG 127833 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || |||||||| || | | ||| ||||| | | ||| || || Sbjct 127832 GCCATCCTCAAGCTGCTTGCCGGCGAAAATCAATCGCTGTTGGTCGGGAGGGATACCCTC 127773 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || ||||| | || | |||| ||| ||| || || || || Sbjct 127772 CTTGTCTTGGATCTTCGACTTGACGTTGTCGATCGTGTCCGAAGACTCCACCTCGAGGGT 127713 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 || || || || || || ||||| |||| Sbjct 127712 GATGGTCTTTCCGGTAAGGGTCTTGACGA 127684 Score = 86.0 bits (94), Expect = 1e-11 Identities = 145/209 (69%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || ||||| || ||||||||||| ||| || ||| | ||||| || | Sbjct 128336 CAAG-TGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTTAGAGTGCGGCCATCCTCCA 128278 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || ||||||||||| | || ||||| | | || |||||||| || || | Sbjct 128277 ACTGCTTACCAGCGAAGATAAGTCGTTGTTGGTCAGGGGGAATACCTTCCTTGTCCTGGA 128218 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| | || | |||| || || ||||| ||||| || || || | Sbjct 128217 TCTTGCTCTTGACGTTGTCAATCGTGTCCGATGATTCAACTTCCAGAGTGATCGTCTTTC 128158 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | || | ||||| ||||||| ||||||| Sbjct 128157 CTGTCAAGGTCTTGACGAAGATCTGCATT 128129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153814916235058