Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq16 185 2e-41 seq39 159 7e-34 seq24 156 9e-33 seq1 105 1e-17 seq12 87.8 4e-12 >seq16 Length=747318 Score = 185 bits (204), Expect = 2e-41 Identities = 180/229 (79%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || ||||| |||| || | ||| || || |||||||||||||| Sbjct 128356 CCACCACGGAGACGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTT 128297 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||||||||| | || || || || ||||| | |||||||||||| ||| Sbjct 128296 AGAGTGCGGCCATCCTCCAACTGCTTACCAGCGAAGATAAGTCGTTGTTGGTCAGGGGGA 128237 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||| |||||||| |||||||| ||| || ||| | || || |||||||| | ||| || Sbjct 128236 ATACCTTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCAATCGTGTCCGATGATTCAAC 128178 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||| |||||||||||||| || ||||| ||||| ||||| ||||||||| Sbjct 128177 TTCCAGAGTGATCGTCTTTCCTGTCAAGGTCTTGACGAAGATCTGCATT 128129 Score = 154 bits (170), Expect = 3e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || || || | || || || || ||||||||||| | Sbjct 127901 ACCACCACGGAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGA 127842 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||||||||| || || || ||||| || ||||| || |||||||| || Sbjct 127841 TAGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAATCGCTGTTGGTCGGGAGG 127782 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||||||||||| | || ||| | ||||| |||||||||| || || Sbjct 127781 GATACCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCGATCGTGTCCGAAGACTCCAC 127722 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 ||||| ||||| ||||| || || | ||||| |||| Sbjct 127721 CTCGAGGGTGATGGTCTTTCCGGTAAGGGTCTTGACGA 127684 Score = 143 bits (158), Expect = 6e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || || ||||| | || ||| || ||||| |||||||| Sbjct 128128 CCACCACGTAGTCGGAGAACGAGATGAAGGGTAGATTCCTTCTGGATATTGTAGTCGCTG 128069 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||| || || || || || || |||||||| | || |||||||| ||| Sbjct 128068 AGGGTTCGGCCGTCTTCCAGCTGCTTACCCGCAAAGATAAGTCGCTGTTGGTCGGGGGGA 128009 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| || ||| ||||| || || ||||||| ||||| || | ||||| Sbjct 128008 ATACCCTCCTTGTCCTGAATC-TTGCTCTTCACATTATCGATGGTGTCTGACGACTCGAC 127950 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| ||||| || |||| |||||| || || |||||||| Sbjct 127949 CTCTAAGGTGATGGTCTTGCCGGTCAGAGTCTTCACAAAGATCTGCAT 127902 Score = 140 bits (154), Expect = 7e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || ||||| || ||||| | ||| || || || ||||||||||| Sbjct 127609 CCACCACGTAGACGAAGGACGAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTC 127550 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| || ||||| ||||| || || || || ||||| || || |||||| ||| Sbjct 127549 AGAGTGCGACCGTCCTCGAGTTGCTTTCCAGCGAAAATCAATCGCTGCTGGTCAGGAGGA 127490 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||| || || ||||| | ||| || | ||||| ||||| || | || || Sbjct 127489 ATGCCTTCCTTATCCTGAATCTTCGATTTGACATTGTCGATGGTGTCGGAGGACTCCACC 127430 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || ||||| ||||| || || | ||||| ||||| |||||||| || Sbjct 127429 TCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATGTT 127380 >seq39 Length=331608 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || || || || | ||||| || || |||||||||||||| | Sbjct 20984 ACCACCACGTAGGCGGAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGA 20925 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||| || || || || || ||||| ||||| || || |||||||| || Sbjct 20924 GAGGGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATTAATCGCTGTTGGTCGGGGGG 20865 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| || ||||| | || || | ||||||||||| || || || Sbjct 20864 GATTCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCGCTAGACTCCAC 20805 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||||||||| | ||||| ||||| |||||||| Sbjct 20804 CTCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCAT 20757 >seq24 Length=497866 Score = 156 bits (172), Expect = 9e-33 Identities = 166/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || ||||| || | || || || |||||||||||||| | Sbjct 474269 ACCACCACGGAGACGGAGGACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGA 474210 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||| ||||| || || || ||||| ||||||| || |||||||| || Sbjct 474209 GAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGG 474150 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| | || || | ||||| ||||| |||| || || Sbjct 474149 GATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCAC 474090 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 ||||| ||||| ||||| ||||||| ||||| ||||| Sbjct 474089 CTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 474051 >seq1 Length=2525816 Score = 105 bits (116), Expect = 1e-17 Identities = 172/248 (69%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 230163 ATCGTCACAGAAGTAGTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGT 230222 ||| ||||||| | || || | ||| |||| ||| | ||| ||| | || || | Sbjct 592315 ATCATCACAGATGCTGTCGCCATCGAACAGGAATTCCTGACCGAGGCTCTGCCCTGTGCT 592256 Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282 || | |||||||| || || | ||| |||||| ||||| ||||| || || || | Sbjct 592255 CTGCTGGGCATGAACGCCAATTTGATGAAGCAATACATCGAGTTCGTCGCCGACCGCCTA 592196 Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342 | || || || || ||||||| || || || | |||||||||| || |||||| Sbjct 592195 CTGGTCGCTCTCGGCAACGAGAAGGTCTACCGATCTACCAACCCCTTCGACTTCATGGAG 592136 Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGG 230402 |||||| || || || || ||||||||||| ||||||||| | || || || | | Sbjct 592135 AACATTTCCCTTGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAGAAG 592076 Query 230403 CCCGGTGT 230410 ||||||| Sbjct 592075 GCCGGTGT 592068 >seq12 Length=989740 Score = 87.8 bits (96), Expect = 4e-12 Identities = 199/292 (68%), Gaps = 12/292 (4%) Strand=Plus/Plus Query 274430 CACGATGGGCGTGATAAATTTCTTCAGGAAACCTGGAATTTCTAGCAGACTGG--GGAAA 274487 |||||| || |||||||||| | | |||||| ||||| | || || || ||| | Sbjct 206817 CACGATAGGTGTGATAAATTCTTGGAAGAAACCAGGAATCTTAAGAAG---GGAAGGATA 206873 Query 274488 C--AACTATGGAAAAAGTTCATGACAAGACCTGATATGTGAGTTCCGTCAACGTCGGCAT 274545 |||| |||| ||||| || | ||||||| || || | ||||| || || Sbjct 206874 TTGAACT-TGGAGGAAGTTGATAAGAAGACCTTTGATATGGCTACCGTCGTGATCCTGAT 206932 Query 274546 CTGTCATGATCATAACATGTCCATACCGAAGCGAGGAAGTATCTTTATACAACTTCCC-T 274604 | | ||| ||||| | ||| ||||||||||| || ||||| |||||| || | Sbjct 206933 CGGCCATAATCATGAGATGACCATACCGAAGGGATTTGGTATCGGTATACACAGTCTTGT 206992 Query 274605 GTTTGAAGCCCAAGAATTTGCTTGAGAGCGGTGA-TTTCTTCGTTCTTTGTGATACTCGC 274663 | || || || | ||||| || | | ||| |||||| ||||| |||| | Sbjct 206993 GCTTCAACCCGAGGAATTG--TTTAATGTTCTGAATTTCTTGATTCTTCATGATCTGATC 207050 Query 274664 CACAGAAGCATCACGTACGTTCAGCAACTTACCGCGGAGAGGGAAAACGCCA 274715 | ||||||||||| |||||||||| |||||| || |||||||| || ||| Sbjct 207051 GATTGAAGCATCACGAACGTTCAGCATCTTACCTCGAAGAGGGAAGACACCA 207102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046733862284292