Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq39 188 7e-43 seq24 152 5e-32 seq16 140 3e-28 seq12 91.5 1e-13 >seq39 Length=331608 Score = 188 bits (208), Expect = 7e-43 Identities = 183/231 (79%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || ||||| || | ||| || || || |||||||||||||| ||||| ||||||||| Sbjct 20983 CCACCACGTAGGCGGAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 20924 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| |||||||||||||||||||| || | ||||||||||| | ||| Sbjct 20923 AGGGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATTAATCGCTGTTGGTCGGGGGGG 20864 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTCC 41812 | | |||||||||| ||| | || | ||| || | || | ||||||||| |||||| Sbjct 20863 ATTCCCTCCTTGTCC-TGAATCTTGGACTTGACATTGTCG--ATAGTGTCGCTAGACTCC 20807 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| | || || || |||||||| || ||||| ||||||||||||||| Sbjct 20806 ACCTCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCATG 20756 >seq24 Length=497866 Score = 152 bits (168), Expect = 5e-32 Identities = 167/220 (76%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || || || ||||||||| ||||| ||||||||| Sbjct 474268 CCACCACGGAGACGGAGGACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 474209 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| ||||||||||| |||||||| ||||||||||||||||| | ||| Sbjct 474208 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGG 474149 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | | |||||||||| ||| || ||| || | || | |||||| ||||||| Sbjct 474148 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATGGTGTCGGAAGACTCCA 474091 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAA 41853 |||| | || || || || |||||||| ||||| ||||| Sbjct 474090 CCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 474051 >seq16 Length=747318 Score = 140 bits (154), Expect = 3e-28 Identities = 174/236 (74%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || |||||||| | || ||||| || ||| ||||||||||||||| |||||| Sbjct 127610 GCCACCACGTAGACGAAGGACGAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGCT 127551 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| |||| ||||| ||||| || ||||| |||| ||||| ||||| | || Sbjct 127550 CAGAGTGCGACCGTCCTCGAGTTGCTTTCCAGCGAAAATCAATCGCTGCTGGTCAGGAGG 127491 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || || ||||| ||| ||| | || | || || | | | |||||| ||||||| Sbjct 127490 AATGCCTTCCTTATCC-TGAATCTTCGATTTGACATTGTCGATGGTGTCGGAGGACTCCA 127432 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTTATCG 41869 |||| | || || || || || || || ||||| ||||| ||||||||||| ||| Sbjct 127431 CCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATGTTGTCG 127376 Score = 111 bits (122), Expect = 1e-19 Identities = 157/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || || ||||||||||||||| |||||||| Sbjct 127900 CCACCACGGAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAT 127841 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || ||||||||||||||||| |||| ||||||||||| | || Sbjct 127840 AGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAATCGCTGTTGGTCGGGAGGG 127781 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||||||| ||| || ||| ||| | | | ||||| |||||||| Sbjct 127780 ATACCCTCCTTGTCTTGGATCTTCGACTT-GACGTTGTCGATCGTGTCCGAAGACTCCAC 127722 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852 ||| | || || || || || || || ||||| |||| Sbjct 127721 CTCGAGGGTGATGGTCTTTCCGGTAAGGGTCTTGACGA 127684 Score = 111 bits (122), Expect = 1e-19 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || ||||| || | || ||||| || || |||||||| || || |||||| | Sbjct 128128 CCACCACGTAGTCGGAGAACGAGATGAAGGGTAGATTCCTTCTGGATATTGTAGTCGCTG 128069 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| || |||||||| || || || || || ||||||||||| | |||| Sbjct 128068 AGGGTTCGGCCGTCTTCCAGCTGCTTACCCGCAAAGATAAGTCGCTGTTGGTCGGGGGGA 128009 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGA-CGACACAGTGTCGCTCGACTCCA 41813 | | |||||||||| || || ||||| | | || | ||||| |||||| | Sbjct 128008 ATACCCTCCTTGTCCTGAATCTTGCTCTTCACATTATCG--ATGGTGTCTGACGACTCGA 127951 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || || || || ||||| ||||| || || |||||||| Sbjct 127950 CCTCTAAGGTGATGGTCTTGCCGGTCAGAGTCTTCACAAAGATCTGCAT 127902 >seq12 Length=989740 Score = 91.5 bits (100), Expect = 1e-13 Identities = 99/129 (77%), Gaps = 3/129 (2%) Strand=Plus/Plus Query 85780 CCCCGCCGGG-CTGCTACATTCGTATCGCACCTCGTTCCGGCCTCGCCAGCAAGCACGGT 85838 |||||||||| || ||| || ||||| || || ||||| || ||| ||||||| Sbjct 360384 CCCCGCCGGGACT--TACGGCCGCATCGCCCCGCGCTCCGGTCTAGCCGCCAAGCACTTC 360441 Query 85839 ATCGACGTGGGCGCCGGGGTCATCGACGCCGACTACCGCGGAAACGTCATCATCGTACTC 85898 |||||| |||||| || ||||||||||||||||||||||| ||||| || | || Sbjct 360442 ATCGACACGGGCGCGGGCGTCATCGACGCCGACTACCGCGGCCCCGTCAAGGTCCTCCTG 360501 Query 85899 TTCAACCAC 85907 ||||||||| Sbjct 360502 TTCAACCAC 360510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462301700037600