Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01- 13] 561 sequences; 33,427,969 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq7 156 9e-33 >seq7 Length=77910 Score = 156 bits (172), Expect = 9e-33 Identities = 316/459 (69%), Gaps = 10/459 (2%) Strand=Plus/Plus Query 230180 AGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCC- 230238 |||||||||| |||| | ||| || ||||| | || || || || ||| | Sbjct 72930 AGCGTCTCGTTGCCTTTGCTGCTGTCGAGGGTATCTTCTTCTCTGGTGCCTT-TGCTTCT 72988 Query 230239 ATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATC 230298 ||||| ||||| || || ||| |||||||||| || | ||||||||| | ||| Sbjct 72989 ATCTTCTGGCTACGTAAGCGTGGTCTGATGCCTGGTCTGACCTTCTCTAACGAGCTTATC 73048 Query 230299 AGTCGCGACGAGGGTCTCCATCAACAG-TTCGGCGAGCTTATGTATTCAAAGCTCCAGAA 230357 || || |||||| | || |||| || || |||| | | ||| || | ||| Sbjct 73049 TCCCGTGATGAGGGTTTGCAC--ACAGATTTTGCTTGCTTGT-TGTTCTC-GCACTTGAA 73104 Query 230358 CAAGCTACCATTCGAG--AC-GGTCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAA 230414 ||| | || | || || |||| || | || || || || || |||| | ||| || Sbjct 73105 CAACCGTCCTAGCAAGGAACTGGTCGAAAAGATTATCACTGATGCTGTTGTCATCGAGAA 73164 Query 230415 GGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGGG 230474 ||||||| | ||| ||| |||| || | || | ||||||||||| || || ||| Sbjct 73165 GGAGTTCTTAACTGAGGCTCTTCCTTGCGGTCTGCTAGGCATGAACGCCGATCTGATGAA 73224 Query 230475 ACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTA 230534 |||||||| || ||||| || ||||| | | ||||| ||||| |||| |||||||| Sbjct 73225 GCAGTACATTGAGTTCGTTGCTGACCGTCTCCTGGTTGCCCTTGGCAACGACAAAGTGTA 73284 Query 230535 CAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTT 230594 | ||| |||||||| | || |||||| |||||| || ||| ||||||||||| Sbjct 73285 CCGTGCTACAAACCCCTTCGACTTCATGGAGAACATTTCTCTGGGAGGCAAGACCAACTT 73344 Query 230595 CTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGT 230633 ||| || |||||||| ||||||| || | | | ||||| Sbjct 73345 CTTTGAGAAGCGTGTTGGTGACTACCAAAAGGCCGGTGT 73383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057816396559430