Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01-
13] 561 sequences; 33,427,969 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq7 156 9e-33
>seq7
Length=77910
Score = 156 bits (172), Expect = 9e-33
Identities = 316/459 (69%), Gaps = 10/459 (2%)
Strand=Plus/Plus
Query 230180 AGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCC- 230238
|||||||||| |||| | ||| || ||||| | || || || || ||| |
Sbjct 72930 AGCGTCTCGTTGCCTTTGCTGCTGTCGAGGGTATCTTCTTCTCTGGTGCCTT-TGCTTCT 72988
Query 230239 ATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATC 230298
||||| ||||| || || ||| |||||||||| || | ||||||||| | |||
Sbjct 72989 ATCTTCTGGCTACGTAAGCGTGGTCTGATGCCTGGTCTGACCTTCTCTAACGAGCTTATC 73048
Query 230299 AGTCGCGACGAGGGTCTCCATCAACAG-TTCGGCGAGCTTATGTATTCAAAGCTCCAGAA 230357
|| || |||||| | || |||| || || |||| | | ||| || | |||
Sbjct 73049 TCCCGTGATGAGGGTTTGCAC--ACAGATTTTGCTTGCTTGT-TGTTCTC-GCACTTGAA 73104
Query 230358 CAAGCTACCATTCGAG--AC-GGTCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAA 230414
||| | || | || || |||| || | || || || || || |||| | ||| ||
Sbjct 73105 CAACCGTCCTAGCAAGGAACTGGTCGAAAAGATTATCACTGATGCTGTTGTCATCGAGAA 73164
Query 230415 GGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGGG 230474
||||||| | ||| ||| |||| || | || | ||||||||||| || || |||
Sbjct 73165 GGAGTTCTTAACTGAGGCTCTTCCTTGCGGTCTGCTAGGCATGAACGCCGATCTGATGAA 73224
Query 230475 ACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTA 230534
|||||||| || ||||| || ||||| | | ||||| ||||| |||| ||||||||
Sbjct 73225 GCAGTACATTGAGTTCGTTGCTGACCGTCTCCTGGTTGCCCTTGGCAACGACAAAGTGTA 73284
Query 230535 CAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTT 230594
| ||| |||||||| | || |||||| |||||| || ||| |||||||||||
Sbjct 73285 CCGTGCTACAAACCCCTTCGACTTCATGGAGAACATTTCTCTGGGAGGCAAGACCAACTT 73344
Query 230595 CTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGT 230633
||| || |||||||| ||||||| || | | | |||||
Sbjct 73345 CTTTGAGAAGCGTGTTGGTGACTACCAAAAGGCCGGTGT 73383
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057816396559430
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |