Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01-
13] 561 sequences; 33,427,969 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq7 183 3e-41
>seq7
Length=77910
Score = 183 bits (202), Expect = 3e-41
Identities = 565/864 (65%), Gaps = 20/864 (2%)
Strand=Plus/Minus
Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733
||||||| || | ||| || || || || ||||| || ||||| | ||||| || ||||
Sbjct 73373 TTTGGTAGTCACCAACACGCTTCTCAAAGAAGTTGGTCTTGCCTCCCAGAGAAATGTTCT 73314
Query 16734 CCATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793
||||||| || || || || ||||| | | ||| || || || | | | |
Sbjct 73313 CCATGAAGTCGAAGGGGTTTGTAGCACGGTACACTTTGTCGTTGCCAAGGGCAACCAGGA 73254
Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGAC 16853
| || || || || || || || || ||| | ||| |||||| |||| ||||
Sbjct 73253 GACGGTCAGCAACGAACTCAATGTACTGCTTCATCAGATCGGCGTTCATGCCTAGCAGAC 73194
Query 16854 GTACCGGAAGAGCTTCCGTCAAAAA-TCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912
|||||||| || || || || || || ||| || ||||| || || | |||||
Sbjct 73193 CGCAAGGAAGAGCCTCAGTTAAGAACTCCTT-CTCGATGACAACAGCATCAGTGATAATC 73135
Query 16913 CTAGCAACTCGTTCCTCG----GACGGTGTATGTTTAAGATGTTTAAACATCAGACATGC 16968
| | || |||||| | |||||| |||| ||| || |||| || || ||
Sbjct 73134 TTTTCGACCAGTTCCTTGCTAGGACGGT---TGTTCAAG-TGCGAGAACAACAAGCAAGC 73079
Query 16969 GAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGG 17028
||||| || || ||||| || | | |||||| |||||||| || |||| || ||
Sbjct 73078 AAAATCTGTGTGCAAACCCTCATCACGGGAGATAAGCTCGTTAGAGAAGGTCAGACCAGG 73019
Query 17029 CATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACC 17088
|||| || || || || ||| || || | || || | ||||| ||||| |||||
Sbjct 73018 CATCAGACCACGCTTACGTAGCCAGAAGATAGAAGCAAAGGCACCAGAGAAGAAGATACC 72959
Query 17089 CTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCA 17148
|||||| | ||||| || | | || | | || | || | ||| ||| | ||||||
Sbjct 72958 CTCGACAGCAGCAAAGGCAACGAGACGCTGGCCGAAGGTGGATTCTCTGTCGCAAATCCA 72899
Query 17149 TTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAA 17208
|| | |||| || || || | ||||| || || || ||||| || || |
Sbjct 72898 CTTAAGGGCCCAATCAGCCTTACGGCGGATGCAGGGGATGGTGTCAATGGCGTTGAACAG 72839
Query 17209 TTTCTCTTTTTCCTGT--AGG-TCGATTATATACGTATCGATGAGTAGGCTGTACATTTC 17265
| | | ||| ||| || | || || |||||||| | |||| ||| | ||
Sbjct 72838 GTA---TGTGCGCTGAGCAGGCTCCTTGATGTAAGTATCGATCAATAGGGAGTAGGTCTC 72782
Query 17266 GGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTG 17325
|||||| ||||||||||| ||||| || ||||| ||||| || || || | || ||
Sbjct 72781 GGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGGATCTG 72722
Query 17326 AACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAA 17385
|| || | |||| || || | ||||| ||||| || || || || || || ||
Sbjct 72721 GACCTCACCAGAGAAACGCTCAACCAGATTCTCGTTGACAATACCATCAGAGGCAGCAAA 72662
Query 17386 AAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGA---ACGCGCCAGTC 17442
|| |||| || || ||||| |||| |||||| || ||| | ||||||
Sbjct 72661 GAAAGCCAGGATGTGGGAGATGAAGTATTGCTCGTCCTTGGTTAGACGGTTGTTCCAGTC 72602
Query 17443 CTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTT 17502
| | ||| ||||||| ||| | || || | |||||||||| ||| | ||||| ||
Sbjct 72601 GTGGAGATCCTTGGATAGATCAATCTCCTCAGCGGTCCAAAAAGATGCCTCGGCCTTCTT 72542
Query 17503 ATACATATTCCAAATATCATTGTA 17526
||||| | ||| || | ||||||
Sbjct 72541 GTACATCTGCCAGATCT-ATTGTA 72519
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517541970711480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |