Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01- 13] 561 sequences; 33,427,969 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq7 183 3e-41 >seq7 Length=77910 Score = 183 bits (202), Expect = 3e-41 Identities = 565/864 (65%), Gaps = 20/864 (2%) Strand=Plus/Minus Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733 ||||||| || | ||| || || || || ||||| || ||||| | ||||| || |||| Sbjct 73373 TTTGGTAGTCACCAACACGCTTCTCAAAGAAGTTGGTCTTGCCTCCCAGAGAAATGTTCT 73314 Query 16734 CCATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793 ||||||| || || || || ||||| | | ||| || || || | | | | Sbjct 73313 CCATGAAGTCGAAGGGGTTTGTAGCACGGTACACTTTGTCGTTGCCAAGGGCAACCAGGA 73254 Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGAC 16853 | || || || || || || || || ||| | ||| |||||| |||| |||| Sbjct 73253 GACGGTCAGCAACGAACTCAATGTACTGCTTCATCAGATCGGCGTTCATGCCTAGCAGAC 73194 Query 16854 GTACCGGAAGAGCTTCCGTCAAAAA-TCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912 |||||||| || || || || || || ||| || ||||| || || | ||||| Sbjct 73193 CGCAAGGAAGAGCCTCAGTTAAGAACTCCTT-CTCGATGACAACAGCATCAGTGATAATC 73135 Query 16913 CTAGCAACTCGTTCCTCG----GACGGTGTATGTTTAAGATGTTTAAACATCAGACATGC 16968 | | || |||||| | |||||| |||| ||| || |||| || || || Sbjct 73134 TTTTCGACCAGTTCCTTGCTAGGACGGT---TGTTCAAG-TGCGAGAACAACAAGCAAGC 73079 Query 16969 GAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGG 17028 ||||| || || ||||| || | | |||||| |||||||| || |||| || || Sbjct 73078 AAAATCTGTGTGCAAACCCTCATCACGGGAGATAAGCTCGTTAGAGAAGGTCAGACCAGG 73019 Query 17029 CATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACC 17088 |||| || || || || ||| || || | || || | ||||| ||||| ||||| Sbjct 73018 CATCAGACCACGCTTACGTAGCCAGAAGATAGAAGCAAAGGCACCAGAGAAGAAGATACC 72959 Query 17089 CTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCA 17148 |||||| | ||||| || | | || | | || | || | ||| ||| | |||||| Sbjct 72958 CTCGACAGCAGCAAAGGCAACGAGACGCTGGCCGAAGGTGGATTCTCTGTCGCAAATCCA 72899 Query 17149 TTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAA 17208 || | |||| || || || | ||||| || || || ||||| || || | Sbjct 72898 CTTAAGGGCCCAATCAGCCTTACGGCGGATGCAGGGGATGGTGTCAATGGCGTTGAACAG 72839 Query 17209 TTTCTCTTTTTCCTGT--AGG-TCGATTATATACGTATCGATGAGTAGGCTGTACATTTC 17265 | | | ||| ||| || | || || |||||||| | |||| ||| | || Sbjct 72838 GTA---TGTGCGCTGAGCAGGCTCCTTGATGTAAGTATCGATCAATAGGGAGTAGGTCTC 72782 Query 17266 GGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTG 17325 |||||| ||||||||||| ||||| || ||||| ||||| || || || | || || Sbjct 72781 GGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGGATCTG 72722 Query 17326 AACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAA 17385 || || | |||| || || | ||||| ||||| || || || || || || || Sbjct 72721 GACCTCACCAGAGAAACGCTCAACCAGATTCTCGTTGACAATACCATCAGAGGCAGCAAA 72662 Query 17386 AAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGA---ACGCGCCAGTC 17442 || |||| || || ||||| |||| |||||| || ||| | |||||| Sbjct 72661 GAAAGCCAGGATGTGGGAGATGAAGTATTGCTCGTCCTTGGTTAGACGGTTGTTCCAGTC 72602 Query 17443 CTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTT 17502 | | ||| ||||||| ||| | || || | |||||||||| ||| | ||||| || Sbjct 72601 GTGGAGATCCTTGGATAGATCAATCTCCTCAGCGGTCCAAAAAGATGCCTCGGCCTTCTT 72542 Query 17503 ATACATATTCCAAATATCATTGTA 17526 ||||| | ||| || | |||||| Sbjct 72541 GTACATCTGCCAGATCT-ATTGTA 72519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517541970711480