Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01- 13] 561 sequences; 33,427,969 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq366 96.9 7e-15 >seq366 Length=257842 Score = 96.9 bits (106), Expect = 7e-15 Identities = 198/289 (69%), Gaps = 4/289 (1%) Strand=Plus/Minus Query 35333 ATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCA 35392 |||||| ||| || || ||||| || | | | |||||| || | | | |||| Sbjct 225109 ATCTGGGACGGCAACGGATCGCGCGAGTATCTAGACAGTGTTGGACTCGGCCACCGAGCC 225050 Query 35393 GAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGAT 35452 | || ||||| || |||||||| |||||||||||||||||||| || || ||||| || Sbjct 225049 GTCGGTGATTTAGGTCCCGTATATGGATTCCAATGGCGTCATTTCGGCGCAGAATA-CAT 224991 Query 35453 ACCTGTTC-TTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGAC 35511 | | || | |||||||| ||| ||||| | |||||| | || | | | | | Sbjct 224990 AGATTCTCAGACGGATTATACGGGACAGGGTGTAGATCAACTCGCGGAGGTCATTCATAA 224931 Query 35512 CCTGAGAGA-AAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATC 35570 |||| ||| || || ||||| | | || || |||| || ||||| || ||| | Sbjct 224930 GCTGA-AGACCAACCCGTATGATCGCCGTATCATCATGAGTGCGTGGAACCCCGCGGACC 224872 Query 35571 TTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619 | | |||||||| |||||||| |||||| |||||| || || || Sbjct 224871 TGAAGAAGATGGCTCTGCCTCCATGTCACATGTTTGCTCAGTTCTACGT 224823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989576887055755