Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01-
13] 561 sequences; 33,427,969 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq7 188 9e-43
>seq7
Length=77910
Score = 188 bits (208), Expect = 9e-43
Identities = 558/851 (66%), Gaps = 12/851 (1%)
Strand=Plus/Minus
Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350
|||||||| ||||| ||||| || || || || || || || ||| ||| || || ||
Sbjct 73374 TTTTGGTAGTCACCAACACGCTTCTCAAAGAAGTTGGTCTTGCCTCCCAGAGAAATGTTC 73315
Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410
|||||||| || || || || ||| || ||| | ||| | || | || |
Sbjct 73314 TCCATGAAGTCGAAGGGGTTTGTAGCACGGTACACTTTGTCGTTGCCAAGGGCAACCAGG 73255
Query 33411 AATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGT 33470
| | || || ||||| || || || ||||||| || ||||| |||| ||
Sbjct 73254 AGACGGTCAGCAACGAACTCAATGTACTGCTTCATCAGATCGGCGTTCATGCCTAGCAGA 73195
Query 33471 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAAT 33529
||||||||| |||| ||||| | ||| | | ||| || |||| || |||||
Sbjct 73194 CCGCAAGGAAGAGCCTCAGTTAAGAACTCCTTCT-CGATGACAACAGCATCAGTGATAAT 73136
Query 33530 AAAT-CTAACGGTTTCTTCACTCGGT-GGATGTAATAAATGTTTAAACATCAAACATGCG 33587
| | | | ||| ||| || || || ||| || || |||| ||| || ||
Sbjct 73135 CTTTTCGACCAGTTCCTTG-CTAGGACGGTTGTTC-AAGTGCGAGAACAACAAGCAAGCA 73078
Query 33588 AAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGC 33647
||||| ||||| |||||| || | || | |||||||| || || || || |||
Sbjct 73077 AAATCTGTGTGCAAACCCTCATCACGGGAGATAAGCTCGTTAGAGAAGGTCAGACCAGGC 73018
Query 33648 ATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCT 33707
|| || |||||||| ||||| || || ||||| || | || || |||||||| ||
Sbjct 73017 ATCAGACCACGCTTACGTAGCCAGAAGATAGAAGCAAAGGCACCAGAGAAGAAGATACCC 72958
Query 33708 TCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGTATCCAC 33764
|| || ||||||||||||| || | || || | || | ||||| ||||||
Sbjct 72957 TCGACAGCAGCAAAGGCAACGAGACGCTGGCCGAAGGTGGATTCTCTGTCGCAAATCCAC 72898
Query 33765 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 33824
|| | |||||||| ||||| | || || || || || ||||| || || ||
Sbjct 72897 TTAAGGGCCCAATCAGCCTTACGGCGGATGCAGGGGATGGTGTCAATGGCGTTGAACAGG 72838
Query 33825 TAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAA 33884
|| | | | | || || | |||||||||||||| || || | || ||
Sbjct 72837 TATGTGCGCTGAGCAGGCTCCTTGATGTAAGTATCGATCAATAGGGAGTAGGTCTCGGAG 72778
Query 33885 TGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACT 33944
|| ||||| || || ||||| || |||||||| || | |||||||| ||||| ||
Sbjct 72777 TGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGGATCTGGACC 72718
Query 33945 TCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAAC 34004
|| | | || || || | | ||| || || || || |||||| ||| ||||| ||
Sbjct 72717 TCACCAGAGAAACGCTCAACCAGATTCTCGTTGACAATACCATCAGAGGCAGCAAAGAAA 72658
Query 34005 GCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCAATCATTG 34061
|||| | || || || |||| ||||| |||| | || ||||| || | |
Sbjct 72657 GCCAGGATGTGGGAGATGAAGTATTGCTCGTCCTTGGTTAGACGGTTGTTCCAGTCGTGG 72598
Query 34062 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 34121
| ||| || |||| ||| | || || | |||||||| |||||||| ||||| || |||
Sbjct 72597 AGATCCTTGGATAGATCAATCTCCTCAGCGGTCCAAAAAGATGCCTCGGCCTTCTTGTAC 72538
Query 34122 ATATTCCAGAT 34132
|| | ||||||
Sbjct 72537 ATCTGCCAGAT 72527
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629813183404080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |