Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01- 13] 561 sequences; 33,427,969 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq7 181 2e-40 >seq7 Length=77910 Score = 181 bits (200), Expect = 2e-40 Identities = 554/850 (65%), Gaps = 10/850 (1%) Strand=Plus/Minus Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728 |||||||| ||||| ||||| || || || || || || || ||| ||| || || || Sbjct 73374 TTTTGGTAGTCACCAACACGCTTCTCAAAGAAGTTGGTCTTGCCTCCCAGAGAAATGTTC 73315 Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788 |||||||| || || || || ||| || || | ||| | || | || | Sbjct 73314 TCCATGAAGTCGAAGGGGTTTGTAGCACGGTACACTTTGTCGTTGCCAAGGGCAACCAGG 73255 Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 49848 | | || || || || || || || ||||||| || ||||| |||| || Sbjct 73254 AGACGGTCAGCAACGAACTCAATGTACTGCTTCATCAGATCGGCGTTCATGCCTAGCAGA 73195 Query 49849 TTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 49907 ||||||||| |||| ||||| | ||| | | ||| || ||||| || ||||| Sbjct 73194 CCGCAAGGAAGAGCCTCAGTTAAGAACTCCTTCT-CGATGACAACAGCATCAGTGATAAT 73136 Query 49908 AGAT-CTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 49966 | | | | ||| ||| || || | | || || |||| ||| || || | Sbjct 73135 CTTTTCGACCAGTTCCTTG-CTAGGACGGTTGTTCAAGTGCGAGAACAACAAGCAAGCAA 73077 Query 49967 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 50026 |||| ||||| |||||| || | || || ||||| || || || || || |||| Sbjct 73076 AATCTGTGTGCAAACCCTCATCACGGGAGATAAGCTCGTTAGAGAAGGTCAGACCAGGCA 73017 Query 50027 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTT 50086 | || |||||||| ||||| || || || ||||| | ||||| |||||||| || | Sbjct 73016 TCAGACCACGCTTACGTAGCCAGAAGATAGAAGCAAAGGCACCAGAGAAGAAGATACCCT 72957 Query 50087 CTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGTATCCACT 50143 | || || ||||||||||| || | || || | ||| | ||||| ||||||| Sbjct 72956 CGACAGCAGCAAAGGCAACGAGACGCTGGCCGAAGGTGGATTCTCTGTCGCAAATCCACT 72897 Query 50144 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 50203 | | |||||||| ||||| | || || || || || ||||| || || || | Sbjct 72896 TAAGGGCCCAATCAGCCTTACGGCGGATGCAGGGGATGGTGTCAATGGCGTTGAACAGGT 72837 Query 50204 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 50263 | | | | | || || | |||||||||||||| || || | || || | Sbjct 72836 ATGTGCGCTGAGCAGGCTCCTTGATGTAAGTATCGATCAATAGGGAGTAGGTCTCGGAGT 72777 Query 50264 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 50323 | ||||| || || ||||| || |||||||| || | |||||||| ||||| || | Sbjct 72776 GGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGGATCTGGACCT 72717 Query 50324 CTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 50383 | | | || || ||| | | ||| || || || || || ||| ||| ||||| || | Sbjct 72716 CACCAGAGAAACGCTCAACCAGATTCTCGTTGACAATACCATCAGAGGCAGCAAAGAAAG 72657 Query 50384 CCAATACATGTTTTATAAAATGTTTTTCG---TTGGGTGTTAGTTTATTCCAATCATTGA 50440 ||| | || || || | || ||| |||| | | || ||||| || | || Sbjct 72656 CCAGGATGTGGGAGATGAAGTATTGCTCGTCCTTGGTTAGACGGTTGTTCCAGTCGTGGA 72597 Query 50441 TATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 50500 ||| || |||| ||| | || || | |||||||| |||||||| ||||| || |||| Sbjct 72596 GATCCTTGGATAGATCAATCTCCTCAGCGGTCCAAAAAGATGCCTCGGCCTTCTTGTACA 72537 Query 50501 TATTCCAGAT 50510 | | |||||| Sbjct 72536 TCTGCCAGAT 72527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718263763140040