Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01-
13] 561 sequences; 33,427,969 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq7 181 2e-40
>seq7
Length=77910
Score = 181 bits (200), Expect = 2e-40
Identities = 554/850 (65%), Gaps = 10/850 (1%)
Strand=Plus/Minus
Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728
|||||||| ||||| ||||| || || || || || || || ||| ||| || || ||
Sbjct 73374 TTTTGGTAGTCACCAACACGCTTCTCAAAGAAGTTGGTCTTGCCTCCCAGAGAAATGTTC 73315
Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788
|||||||| || || || || ||| || || | ||| | || | || |
Sbjct 73314 TCCATGAAGTCGAAGGGGTTTGTAGCACGGTACACTTTGTCGTTGCCAAGGGCAACCAGG 73255
Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 49848
| | || || || || || || || ||||||| || ||||| |||| ||
Sbjct 73254 AGACGGTCAGCAACGAACTCAATGTACTGCTTCATCAGATCGGCGTTCATGCCTAGCAGA 73195
Query 49849 TTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 49907
||||||||| |||| ||||| | ||| | | ||| || ||||| || |||||
Sbjct 73194 CCGCAAGGAAGAGCCTCAGTTAAGAACTCCTTCT-CGATGACAACAGCATCAGTGATAAT 73136
Query 49908 AGAT-CTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 49966
| | | | ||| ||| || || | | || || |||| ||| || || |
Sbjct 73135 CTTTTCGACCAGTTCCTTG-CTAGGACGGTTGTTCAAGTGCGAGAACAACAAGCAAGCAA 73077
Query 49967 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 50026
|||| ||||| |||||| || | || || ||||| || || || || || ||||
Sbjct 73076 AATCTGTGTGCAAACCCTCATCACGGGAGATAAGCTCGTTAGAGAAGGTCAGACCAGGCA 73017
Query 50027 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTT 50086
| || |||||||| ||||| || || || ||||| | ||||| |||||||| || |
Sbjct 73016 TCAGACCACGCTTACGTAGCCAGAAGATAGAAGCAAAGGCACCAGAGAAGAAGATACCCT 72957
Query 50087 CTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGTATCCACT 50143
| || || ||||||||||| || | || || | ||| | ||||| |||||||
Sbjct 72956 CGACAGCAGCAAAGGCAACGAGACGCTGGCCGAAGGTGGATTCTCTGTCGCAAATCCACT 72897
Query 50144 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 50203
| | |||||||| ||||| | || || || || || ||||| || || || |
Sbjct 72896 TAAGGGCCCAATCAGCCTTACGGCGGATGCAGGGGATGGTGTCAATGGCGTTGAACAGGT 72837
Query 50204 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 50263
| | | | | || || | |||||||||||||| || || | || || |
Sbjct 72836 ATGTGCGCTGAGCAGGCTCCTTGATGTAAGTATCGATCAATAGGGAGTAGGTCTCGGAGT 72777
Query 50264 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 50323
| ||||| || || ||||| || |||||||| || | |||||||| ||||| || |
Sbjct 72776 GGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGGATCTGGACCT 72717
Query 50324 CTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 50383
| | | || || ||| | | ||| || || || || || ||| ||| ||||| || |
Sbjct 72716 CACCAGAGAAACGCTCAACCAGATTCTCGTTGACAATACCATCAGAGGCAGCAAAGAAAG 72657
Query 50384 CCAATACATGTTTTATAAAATGTTTTTCG---TTGGGTGTTAGTTTATTCCAATCATTGA 50440
||| | || || || | || ||| |||| | | || ||||| || | ||
Sbjct 72656 CCAGGATGTGGGAGATGAAGTATTGCTCGTCCTTGGTTAGACGGTTGTTCCAGTCGTGGA 72597
Query 50441 TATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 50500
||| || |||| ||| | || || | |||||||| |||||||| ||||| || ||||
Sbjct 72596 GATCCTTGGATAGATCAATCTCCTCAGCGGTCCAAAAAGATGCCTCGGCCTTCTTGTACA 72537
Query 50501 TATTCCAGAT 50510
| | ||||||
Sbjct 72536 TCTGCCAGAT 72527
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718263763140040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |