Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01-
13] 561 sequences; 33,427,969 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq7 105 6e-18
>seq7
Length=77910
Score = 105 bits (116), Expect = 6e-18
Identities = 534/843 (63%), Gaps = 11/843 (1%)
Strand=Plus/Minus
Query 13581 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13640
||||| || |||| ||| | || ||||||||||| || || ||| |||| || || ||
Sbjct 73374 TTTTGGTAGTCACCAACACGCTTCTCAAAGAAGTTGGTCTTGCCTCCCAGAGAAATGTTC 73315
Query 13641 TCCATAAAATCAAATGGATTTATTGACATAAACACTTTATCACAACCTAGTTCTAATAGT 13700
||||| || || || || ||| | | ||||||| || || || | | ||
Sbjct 73314 TCCATGAAGTCGAAGGGGTTTGTAGCACGGTACACTTTGTCGTTGCCAAGGGCAACCAGG 73255
Query 13701 AATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 13760
| | ||||||| |||||||| || || ||| | ||| ||||| |||| ||
Sbjct 73254 AGACGGTCAGCAACGAACTCAATGTACTGCTTCATCAGATCGGCGTTCATGCCTAGCAGA 73195
Query 13761 TTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACA-CAGCCTCTTTTATAAT 13819
||||| | ||||| || || || || || |||| |||| || | |||||
Sbjct 73194 CCGCAAGGAAGAGCCTCAGTTAAGAACTCCTTCTCGAT-GACAACAGCATCAGTGATAAT 73136
Query 13820 AATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAA 13879
|| | | || || |||| | | || | || || | || || |||||
Sbjct 73135 CTTTTCGACCAGTTCCTTGCTAGGACGGTTGTTCAAGTGCGAGAACAACAAGCAAGCAAA 73076
Query 13880 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCAT 13939
||| || | |||||||| | ||||| ||||| || || || | || |||||
Sbjct 73075 ATCTGTGTGCAAACCCTCATCACGGGAGATAAGCTCGTTAGAGAAGGTCAGACCAGGCAT 73016
Query 13940 CAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTC 13999
|| || || || || ||| || || | |||||| | || || ||||| || |||||
Sbjct 73015 CAGACCACGCTTACGTAGCCAGAAGATAGAAGCAAAGGCACCAGAGAAGAAGATACCCTC 72956
Query 14000 AACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTT 14059
|| |||||||| || | | || | || || | | || | ||| | ||||| ||
Sbjct 72955 GACAGCAGCAAAGGCAACGAGACGCTGGCCGAAGGTGGATTCTCTGTCGCAAATCCACTT 72896
Query 14060 TCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATA 14119
||||| |||| || || | || || ||||| || || || | ||
Sbjct 72895 AAGGGCCCAATCAGCCTTACGGCGGATGCAGGGGATGGTGTCAATGGCGTTGAACAGGTA 72836
Query 14120 TTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAG 14177
| || || | ||||| |||| ||||| || | || | || | || |||
Sbjct 72835 TGTGCGCTGAGCAGGCTCCTTGA--TGTAAGTATCGATCAATAGGGAGTAGGTCTCGGAG 72778
Query 14178 TGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACT 14237
|| ||||| ||||| ||||| ||||| || ||||| | ||| || | || ||
Sbjct 72777 TGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGGATCTGGACC 72718
Query 14238 TC-CGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAA 14296
|| | || ||| | || ||| ||| || || || ||||||||| || ||||| ||
Sbjct 72717 TCACCAGAGAAA-CGCTCAACCAGATTCTCGTTGACAATACCATCAGAGGCAGCAAAGAA 72659
Query 14297 TGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGA---GTTTTTTCCAATCGGA 14353
|||| |||| || ||||||||||| || ||| | | | || ||||| |||
Sbjct 72658 AGCCAGGATGTGGGAGATGAAGTATTGCTCGTCCTTGGTTAGACGGTTGTTCCAGTCGTG 72599
Query 14354 TAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATA 14413
| |||||| || ||||| | || ||| | ||||||||| || | || || || ||
Sbjct 72598 GAGATCCTTGGATAGATCAATCTCCTCAGCGGTCCAAAAAGATGCCTCGGCCTTCTTGTA 72539
Query 14414 CAT 14416
|||
Sbjct 72538 CAT 72536
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479724635907400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |