Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01-
13] 561 sequences; 33,427,969 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq85 109 8e-19
>seq85
Length=153405
Score = 109 bits (120), Expect = 8e-19
Identities = 304/461 (66%), Gaps = 4/461 (1%)
Strand=Plus/Plus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| || || || || || || || | ||| | ||| |||| || |||||||| ||
Sbjct 95724 CAGGGTGGTAACAAGCGCCCCGGTGCCTTTGCCATTTACCTGGAGCCGTGGCACGCCGAT 95783
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|| || || || | || ||||||| ||| ||| || ||| || ||| | ||
Sbjct 95784 GTGTTCGAGTTCCTTGATCTGCGCAAGAACCACGGCAAGGAGGAGATTCGTGCCCGTGAT 95843
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055
|||| ||||| ||| | || ||| ||||||||||||| ||| | | | | ||
Sbjct 95844 CTGTTCCTAGCACTGTGGATTCCCGATCTGTTCATGAAGCGTGTCGAAAAGAACGCCAAC 95903
Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115
|||| || |||||||| | || || || || | ||||||| ||||| |||||
Sbjct 95904 TGGACACTCATGTGCCCTAATGAGTGCCCTGGACTAGCTGATTGCTACGGCGAGGAGTTC 95963
Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGCACG 97174
||||| ||| | |||||| || ||||| ||| || | || | || |
Sbjct 95964 GAGGCTCTGTATGAGAAGTACGAGAGTGAAGGCCGTGGCCGTCTTACCA-TCAAGGC-CC 96021
Query 97175 AGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCT 97233
|||| |||||| | ||||| | ||| ||| ||||| || | || | ||| || |
Sbjct 96022 AGAAGCTGTGGTACGCCATTCTCGAGGCCCAGACCGAGACCGGCAACCCATTCATGCTGT 96081
Query 97234 ACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCA 97293
||||||| || || || |||||||| || | ||||| ||| ||||||
Sbjct 96082 ACAAGGACGCCTGCAACAAGAAGAGCAACCAGAAAAACCTAGGCACTATCCGCAGCTCCA 96141
Query 97294 ATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334
|||| ||||| ||||| | |||||| | |||| || |||
Sbjct 96142 ATCTATGCACTGAAATCATCGAGTACTGCGCTCCCGATGAG 96182
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741054003322360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |