Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01-
13] 561 sequences; 33,427,969 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq541 89.7 4e-13
>seq541
Length=95397
Score = 89.7 bits (98), Expect = 4e-13
Identities = 123/172 (72%), Gaps = 0/172 (0%)
Strand=Plus/Plus
Query 5582 CGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCG 5641
||||| ||||||||| || || || |||||| ||| | |||||| || | | |
Sbjct 57845 CGCTCTAGGATCAGCTGGGCAATGCGATCGCCCTCCTTGATCTCGAAGTCCGTCTCGTTA 57904
Query 5642 AAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCC 5701
||||||||| | || || | || ||||| |||||||| || || || |||||
Sbjct 57905 TGGTTGAACAGAAGAACCTTGACCTCACCACGGTAATCGGCGTCAATGACACCGGCGCCG 57964
Query 5702 ACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753
||||||||||||||| | || |||||||| ||||| || | |||||||
Sbjct 57965 GTATCGATGAAGTGCTTGGCAGCAAGGCCGGAACGGGGGGCGATACGGCCGT 58016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430051459637432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |