Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01-
13] 561 sequences; 33,427,969 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq543 172 9e-39
seq366 109 9e-20
>seq543
Length=133180
Score = 172 bits (190), Expect = 9e-39
Identities = 197/262 (75%), Gaps = 2/262 (1%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| ||| |||||| || ||||| || || ||||||||||| ||||
Sbjct 36640 CGCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATTCAGGGTATCACCAAGCCCGCTA 36582
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| ||||| |||||||||||||| ||||||||| | |||| || |||| || ||||
Sbjct 36581 TCCGCCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTGCCATGATCTACGAGGAGA 36522
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| || | ||| ||||||| || || |||| |||||| || || || |
Sbjct 36521 CCCGCAGCGTCCTCAAGTCCTTCCTCGAGGGTGTCATCCGTGATGCCGTCACATACACGG 36462
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || |||||||| ||||| || ||||| ||||||| || | || | ||||
Sbjct 36461 AGCACGCCAAGCGTAAGACCGTCACTTCTCTGGATGTCGTCTACGCTCTCAAGAGACAAG 36402
Query 16671 GCCGTAAGATTTATGGTTTTGG 16692
|||| | |||| ||||| ||
Sbjct 36401 GCCGCACCCTTTACGGTTTCGG 36380
>seq366
Length=257842
Score = 109 bits (120), Expect = 9e-20
Identities = 87/102 (85%), Gaps = 2/102 (2%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| ||| |||||| || ||||| || || ||||||||||| || |
Sbjct 153010 CGCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATTCAGGGTATCACCAAGCCCGCCA 153068
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
|||||||||| |||||||||||||| || |||||| ||||||
Sbjct 153069 TCCGTCGTCTCGCTCGTCGTGGTGGTGTGAAGCGTATCTCTG 153110
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074687073773
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |