Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01- 13] 561 sequences; 33,427,969 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq543 172 9e-39 seq366 109 9e-20 >seq543 Length=133180 Score = 172 bits (190), Expect = 9e-39 Identities = 197/262 (75%), Gaps = 2/262 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||| |||||| || ||||| || || ||||||||||| |||| Sbjct 36640 CGCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATTCAGGGTATCACCAAGCCCGCTA 36582 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| ||||| |||||||||||||| ||||||||| | |||| || |||| || |||| Sbjct 36581 TCCGCCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTGCCATGATCTACGAGGAGA 36522 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || || | ||| ||||||| || || |||| |||||| || || || | Sbjct 36521 CCCGCAGCGTCCTCAAGTCCTTCCTCGAGGGTGTCATCCGTGATGCCGTCACATACACGG 36462 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || |||||||| ||||| || ||||| ||||||| || | || | |||| Sbjct 36461 AGCACGCCAAGCGTAAGACCGTCACTTCTCTGGATGTCGTCTACGCTCTCAAGAGACAAG 36402 Query 16671 GCCGTAAGATTTATGGTTTTGG 16692 |||| | |||| ||||| || Sbjct 36401 GCCGCACCCTTTACGGTTTCGG 36380 >seq366 Length=257842 Score = 109 bits (120), Expect = 9e-20 Identities = 87/102 (85%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||| |||||| || ||||| || || ||||||||||| || | Sbjct 153010 CGCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATTCAGGGTATCACCAAGCCCGCCA 153068 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 |||||||||| |||||||||||||| || |||||| |||||| Sbjct 153069 TCCGTCGTCTCGCTCGTCGTGGTGGTGTGAAGCGTATCTCTG 153110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074687073773