Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01- 13] 561 sequences; 33,427,969 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq7 190 3e-43 >seq7 Length=77910 Score = 190 bits (210), Expect = 3e-43 Identities = 556/850 (65%), Gaps = 10/850 (1%) Strand=Plus/Minus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 |||||||| ||||| ||||| || || || || || || || ||| ||| || || || Sbjct 73374 TTTTGGTAGTCACCAACACGCTTCTCAAAGAAGTTGGTCTTGCCTCCCAGAGAAATGTTC 73315 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 |||||||| || || || || ||| || || | ||| | || | || | Sbjct 73314 TCCATGAAGTCGAAGGGGTTTGTAGCACGGTACACTTTGTCGTTGCCAAGGGCAACCAGG 73255 Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192 | | || || ||||| || || || ||||||| || ||||| |||| || Sbjct 73254 AGACGGTCAGCAACGAACTCAATGTACTGCTTCATCAGATCGGCGTTCATGCCTAGCAGA 73195 Query 33193 TTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 33251 ||||||||| |||| ||||| | ||| | | ||| || ||||| || ||||| Sbjct 73194 CCGCAAGGAAGAGCCTCAGTTAAGAACTCCTTCT-CGATGACAACAGCATCAGTGATAAT 73136 Query 33252 AGAT-CTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 33310 | | | | ||| ||| || || | | || || |||| ||| || || | Sbjct 73135 CTTTTCGACCAGTTCCTTG-CTAGGACGGTTGTTCAAGTGCGAGAACAACAAGCAAGCAA 73077 Query 33311 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 33370 |||| ||||| |||||| || | || || ||||| || || || || || |||| Sbjct 73076 AATCTGTGTGCAAACCCTCATCACGGGAGATAAGCTCGTTAGAGAAGGTCAGACCAGGCA 73017 Query 33371 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTT 33430 | || |||||||| ||||| || || ||||| || | ||||| |||||||| || | Sbjct 73016 TCAGACCACGCTTACGTAGCCAGAAGATAGAAGCAAAGGCACCAGAGAAGAAGATACCCT 72957 Query 33431 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGTATCCACT 33487 | || ||||||||||||| || | || || | || | ||||| ||||||| Sbjct 72956 CGACAGCAGCAAAGGCAACGAGACGCTGGCCGAAGGTGGATTCTCTGTCGCAAATCCACT 72897 Query 33488 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33547 | | |||||||| ||||| | || || || || || ||||| || || || | Sbjct 72896 TAAGGGCCCAATCAGCCTTACGGCGGATGCAGGGGATGGTGTCAATGGCGTTGAACAGGT 72837 Query 33548 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 33607 | | | | | || || | |||||||||||||| || || | || || | Sbjct 72836 ATGTGCGCTGAGCAGGCTCCTTGATGTAAGTATCGATCAATAGGGAGTAGGTCTCGGAGT 72777 Query 33608 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTT 33667 | ||||| || || ||||| || |||||||| || | |||||||| ||||| || | Sbjct 72776 GGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGGATCTGGACCT 72717 Query 33668 CTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 33727 | | | || || || ||| ||| || || || || || ||| ||| ||||| || | Sbjct 72716 CACCAGAGAAACGCTCAACCAGATTCTCGTTGACAATACCATCAGAGGCAGCAAAGAAAG 72657 Query 33728 CCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCAATCATTGA 33784 ||| | || || || |||| ||||| |||| | || ||||| || | || Sbjct 72656 CCAGGATGTGGGAGATGAAGTATTGCTCGTCCTTGGTTAGACGGTTGTTCCAGTCGTGGA 72597 Query 33785 TATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 33844 ||| || |||| ||| | || || | |||||||| |||||||| ||||| || |||| Sbjct 72596 GATCCTTGGATAGATCAATCTCCTCAGCGGTCCAAAAAGATGCCTCGGCCTTCTTGTACA 72537 Query 33845 TGTTCCAGAT 33854 | | |||||| Sbjct 72536 TCTGCCAGAT 72527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622942831582760