Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01-
13] 561 sequences; 33,427,969 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq85 345 1e-89
>seq85
Length=153405
Score = 345 bits (382), Expect = 1e-89
Identities = 1065/1630 (65%), Gaps = 32/1630 (2%)
Strand=Plus/Plus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
||||| |||||| |||| || | | ||| ||||| || | | | ||| | || ||
Sbjct 95454 TTCACACACGCCTCGCCCACGCTATTCAACGCTGGCACACCGCAGGCCCAGCTATCGTCG 95513
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
||||| || | | ||||||||||| ||| || ||||||| || || || |||| |
Sbjct 95514 TGCTTCCTAGTTGATATGAAGGACGACAGCATTGATGGTATCTACGATACGCTGAAGACT 95573
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725
|||||| | || ||||||| || ||||| || ||| | | || ||||| | | |||||
Sbjct 95574 TGTGCTATGATCTCCAAGATGGCCGGCGGTATCGGTCTGAACG-TCCACCGTATCCGTGC 95632
Query 363726 -ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784
|| | || ||||| ||||| || || || || | ||||||||||| |
Sbjct 95633 CACTGGCTCGT-ACATTGCTGGCACCAACGGCACGTCTAACGGCATTGTTCCCATGCTGC 95691
Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844
|||| || |||| ||||| | ||||||||||||||||| |||||| || || |
Sbjct 95692 GTGTCTTCAACAACACTGCCCGCTACGTCGACCAGGGTGGTAACAAGCGCCCCGGTGCCT 95751
Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904
|||| || || || ||||| || |||||| | || ||||| ||||| || || || |
Sbjct 95752 TTGCCATTTACCTGGAGCCGTGGCACGCCGATGTGTTCGAGTTCCTTGATCTGCGCAAGA 95811
Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964
|| || || ||||| | ||||| |||||||||||| ||||| ||| || | || |
Sbjct 95812 ACCACGGCAAGGAGGAGATTCGTGCCCGTGATCTGTTCCTAGCACTGTGGATTCCCGATC 95871
Query 363965 ATTTTATGAAGCGCGTGGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATG 364022
|| |||||||| || || | | | | || ||| ||||| | ||||| | || ||
Sbjct 95872 TGTTCATGAAGCGTGTCGA--AAAGAACGCCAACTGGACACTCATGTGCCCTAATGAGTG 95929
Query 364023 TCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGA-AT 364081
|| || || | ||| | || || || | | ||||| || || ||||| || |
Sbjct 95930 CCCTGGACTAGCTGATTGCTACGGCGAGGAGTTCGAGGCTCTGTATGAGAAGTACGAGAG 95989
Query 364082 CGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATT 364141
| ||| ||| ||| || || || |||||||| |||| ||||| | ||
Sbjct 95990 TGAAGGCCGTGGC-CGTCTTACCATCAAGGCCCAGAAGCTGTGGTACGCCATTCTCGAGG 96048
Query 364142 CGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCA 364201
| |||| ||||| || | || | ||| ||||||| || | |||||| ||| ||
Sbjct 96049 CCCAGACCGAGACCGGCAACCCATTCATGCTGTACAAGGACGCCTGCAACAAGAAGAGCA 96108
Query 364202 ACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATAC 364260
||||| | |||| || || | || |||| ||| ||||| || || || || || |||
Sbjct 96109 ACCAGAAAAACCTAGGCACTA-TCCGCAGCTCCAATCTATGCACTGAAATCATCGAGTAC 96167
Query 364261 ACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT- 364319
||||||||| ||| ||||||||| ||||| || ||| | || || || | |||||
Sbjct 96168 TGCGCTCCCGATGAGGTTGCCGTATGCAACCTAGCCTCGCTAGCCCTACCATCCTTTGTC 96227
Query 364320 ---------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGC 364370
||| || |||| || |||| | || | || | ||| | ||
Sbjct 96228 GACTACAACAAAGGAGAGTAC----GATTTCCAGAAGCTGCACGAGATCACC-AAGGTGG 96282
Query 364371 TACTTGC--AATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAG 364428
| | ||| || || | ||||||| || | || || | ||||| || |
Sbjct 96283 T-CGTGCGTAACCTGAATCGCATTATCGATGTCAACCACTACCCTGTGCCTGAGGCTCAC 96341
Query 364429 CGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTT 364488
|| |||||||||||||| |||||| ||||||| ||||| || || || | |||
Sbjct 96342 AACAGCAACATGCGTCATCGCCCCATTGGTGTTGGTGTCCAGGGTCTAGCCGATGCTTTC 96401
Query 364489 ATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTT 364548
| || ||| | || || || | || || || ||| || ||| |||||||
Sbjct 96402 CTAGCCCTACGCATGCCTTTCGAGTCTGCCGAGGCCCGCACTCTGAACAAGCAGATCTTC 96461
Query 364549 GAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAG 364608
|| || || || || || ||||||| ||||| || | || ||||| |||| |
Sbjct 96462 GAGACCATCTACCACGCTGCCCTGACTGCCTCGTGCGAGATTGCTCAAACCGAGGGTACT 96521
Query 364609 TACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAAT 364668
||||| || |||||||| || ||| | || ||||| | | ||||| || | |||||
Sbjct 96522 TACTCCACCTATGAGGGTTCGCCTGTATCTCAGGGTATCCTGCAGTTCGACATGTGGAAC 96581
Query 364669 GTCACGCCATCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGG 364727
|| || || || || ||| |||||| |||| | | | | | ||| |||| ||
Sbjct 96582 GTTACCCCTAGTGACCTGTGGGACTGGGCCTCGCTCAAGGAAC-AGATCAAGCAGCACGG 96640
Query 364728 TACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGG 364787
|||||||| || | || || ||||| || || || || | |||||||| ||
Sbjct 96641 CGTGCGCAACTCGCTACTCCTGGCTCCTATGCCAACTGCCTCGACCTCTCAGATCCTAGG 96700
Query 364788 AAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGG 364847
||||||||||||||||| || | || || | || ||||| || || | ||
Sbjct 96701 CAACAACGAGTGCTTCGAGCCTTACACCTCGAACATCTACCAGCGCCGTGTGCTGGCTGG 96760
Query 364848 AGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGG 364907
|| || | ||| ||||| | | | || || ||| | || ||||||
Sbjct 96761 TGAGTTCCAGGTTGTTAACCCCTGGTTGCTGCGTGACCTGGTCGATCTTGGCCTGTGGTC 96820
Query 364908 TGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATT 364967
|||| |||||||||| |||||| || | ||| ||||| || || ||||| || |
Sbjct 96821 CGACACCATGAAGAACCGTATCATTGCGGATAACGGTTCGGTCCAAAACATCCCTAATAT 96880
Query 364968 TCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCAT 365027
|| | || | ||| | | ||||| ||||| ||||| ||||| ||| || | |
Sbjct 96881 CCCCGCCGACATCAAGGCCCTGTACAAGACCGTCTGGGAGATTTCTCAGCGTACCGTTGT 96940
Query 365028 TGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCAT 365087
| ||||| |||||||| || ||||| ||| ||| |||||| | ||| | |||
Sbjct 96941 GCAGATGGCTGCCGATCGTGGCGCTTTCATCGACCAGTCGCAGTCGCTGAACATTCACAT 97000
Query 365088 GACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCT 365147
|| | || || | ||| | || |||||| || ||| ||||| ||||||
Sbjct 97001 GAAGGACCCTACTATGGGTAAGATCACCAGCATGCACTTTGCCGGCTGGAAGCTCGGTCT 97060
Query 365148 TAAGACAGGT 365157
||||| |||
Sbjct 97061 CAAGACCGGT 97070
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303344231738702
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |