Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01- 13] 561 sequences; 33,427,969 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq542 91.5 1e-13 >seq542 Length=123657 Score = 91.5 bits (100), Expect = 1e-13 Identities = 127/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 24010 CATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCA 24069 || |||| || || | || ||| |||| || ||| | ||| |||||||| | |||| Sbjct 106420 CAGTAACCGGCAAGACTATCACCCTCGAGGTTGAGTCATCCGATACCATCGACAATGTCA 106479 Query 24070 AACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCG 24129 | |||||| ||||| || ||||| ||||| || || || | ||||||| || || Sbjct 106480 AGTCCAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCAGCAACGTCTGATTTTCGCCG 106539 Query 24130 GCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTAC 24187 ||||||||||||| || | | | | | || ||||| ||||| ||||| || || || Sbjct 106540 GCAAGCAACTCGAGGACGGCCGCACCCTCTCTGATTACAACATCCAAAAGGAGTCCAC 106597 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 24015 ACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAA 24074 || ||||| | || ||| ||||||||||| || || || ||||| | ||||| Sbjct 106715 ACCGGAAAGACCATCACCCTCGAAGTCGAGTCCTCTGATACTATCGACAACGTCAAGTCC 106774 Query 24075 AAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAG 24134 ||||| || || || ||||| ||||| ||||| ||| | ||||||| || |||||| Sbjct 106775 AAGATCCAGGATAAGGAGGGCATTCCTCCGGATCAGCAGCGTCTGATTTTCGCTGGCAAG 106834 Query 24135 CAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTAC 24187 ||||| ||||||| | | | | | || || ||||| || || || ||||| Sbjct 106835 CAACTTGAAGATGGCCGCACCCTGTCTGACTACAACATCCAGAAGGAGTCTAC 106887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429933060446955