Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01- 13] 561 sequences; 33,427,969 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq542 98.7 8e-16 >seq542 Length=123657 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| |||| ||| || || ||||||||||| ||||||||||||| Sbjct 107373 CCACCACGCAGACGCAGAACCAGATGTAGGGTCGACTCCTTTTGAATGTTGTAGTCGGAT 107314 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| ||||||||| || || || || | || || |||||||||||| || Sbjct 107313 AGGGTGCGACCGTCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGGGGA 107254 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| || | |||||| | | | | |||||| | ||| Sbjct 107253 ATACCCTCCTTGTCCTGGATCTTGGACTTCACGTTGTCAATGGTGTCGGAAGACTCGACC 107194 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||| || || || || || |||||||| |||||||| Sbjct 107193 TCAAGAGTGATGGTCTTGCCAGTGAGAGTCTTGACAAAGATCTGCAT 107147 Score = 86.0 bits (94), Expect = 5e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| |||||| || |||||||| || ||||||||||| | || ||| | | || Sbjct 106902 AGAACCAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 106843 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | ||| ||||| || |||| || ||||| || ||| ||| | |||||| || || Sbjct 106842 TCAAGTTGCTTGCCAGCGAAAATCAGACGCTGCTGATCCGGAGGAATGCCCTCCTTATCC 106783 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | ||| || | | | | ||| || || ||| ||| | ||||||||| Sbjct 106782 TGGATCTTGGACTTGACGTTGTCGATAGTATCAGAGGACTCGACTTCGAGGGTGATGGTC 106723 Query 16904 TTTCCGGTCAGCGTTTTGAC 16923 |||||||| || || || || Sbjct 106722 TTTCCGGTGAGGGTCTTAAC 106703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405085230337390